RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
ARFGAP1-223ENST00000550188 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
ARFGAP1-223ENST00000550188 ABCC9O60706 1549 aa25.44■■□□□ 1.66
ARFGAP1-223ENST00000550188 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
ARFGAP1-223ENST00000550188 NACADO15069 1562 aa24.41■■□□□ 1.5
ARFGAP1-223ENST00000550188 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
ARFGAP1-223ENST00000550188 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
ARFGAP1-223ENST00000550188 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
ARFGAP1-223ENST00000550188 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
ARFGAP1-223ENST00000550188 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
ARFGAP1-223ENST00000550188 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
ARFGAP1-223ENST00000550188 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
ARFGAP1-223ENST00000550188 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
ARFGAP1-223ENST00000550188 SHROOM4Q9ULL8 1493 aa23.5■■□□□ 1.35
ARFGAP1-223ENST00000550188 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
ARFGAP1-223ENST00000550188 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
ARFGAP1-223ENST00000550188 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
ARFGAP1-223ENST00000550188 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
ARFGAP1-223ENST00000550188 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
ARFGAP1-223ENST00000550188 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
ARFGAP1-223ENST00000550188 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
ARFGAP1-223ENST00000550188 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
ARFGAP1-223ENST00000550188 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
ARFGAP1-223ENST00000550188 MROH2BQ7Z745 1585 aa22.43■■□□□ 1.18
ARFGAP1-223ENST00000550188 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
ARFGAP1-223ENST00000550188 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
ARFGAP1-223ENST00000550188 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
ARFGAP1-223ENST00000550188 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
ARFGAP1-223ENST00000550188 WIZO95785 1651 aa22.15■■□□□ 1.14
ARFGAP1-223ENST00000550188 NESP48681 1621 aa21.98■■□□□ 1.11
ARFGAP1-223ENST00000550188 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
ARFGAP1-223ENST00000550188 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
ARFGAP1-223ENST00000550188 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
ARFGAP1-223ENST00000550188 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
ARFGAP1-223ENST00000550188 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
ARFGAP1-223ENST00000550188 CUX2O14529 1486 aa21.77■■□□□ 1.07
ARFGAP1-223ENST00000550188 CFTRP13569 1480 aa21.72■■□□□ 1.07
ARFGAP1-223ENST00000550188 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
ARFGAP1-223ENST00000550188 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
ARFGAP1-223ENST00000550188 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
ARFGAP1-223ENST00000550188 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
ARFGAP1-223ENST00000550188 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
ARFGAP1-223ENST00000550188 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
ARFGAP1-223ENST00000550188 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ARFGAP1-223ENST00000550188 WDR62O43379 1518 aa21.51■■□□□ 1.03
ARFGAP1-223ENST00000550188 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
ARFGAP1-223ENST00000550188 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
ARFGAP1-223ENST00000550188 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
ARFGAP1-223ENST00000550188 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
ARFGAP1-223ENST00000550188 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
ARFGAP1-223ENST00000550188 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
ARFGAP1-223ENST00000550188 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
ARFGAP1-223ENST00000550188 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
ARFGAP1-223ENST00000550188 CUX1P39880 1505 aa21.05■□□□□ 0.96
ARFGAP1-223ENST00000550188 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
ARFGAP1-223ENST00000550188 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
ARFGAP1-223ENST00000550188 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
ARFGAP1-223ENST00000550188 SOGA1O94964 1423 aa20.98■□□□□ 0.95
ARFGAP1-223ENST00000550188 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
ARFGAP1-223ENST00000550188 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
ARFGAP1-223ENST00000550188 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.943e-10■■■□□ 18.7
ARFGAP1-223ENST00000550188 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
ARFGAP1-223ENST00000550188 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
ARFGAP1-223ENST00000550188 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
ARFGAP1-223ENST00000550188 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
ARFGAP1-223ENST00000550188 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
ARFGAP1-223ENST00000550188 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
ARFGAP1-223ENST00000550188 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
ARFGAP1-223ENST00000550188 ABCA10Q8WWZ4 1543 aa20.81■□□□□ 0.92
ARFGAP1-223ENST00000550188 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
ARFGAP1-223ENST00000550188 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
ARFGAP1-223ENST00000550188 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
ARFGAP1-223ENST00000550188 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
ARFGAP1-223ENST00000550188 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
ARFGAP1-223ENST00000550188 FBLN2P98095 1184 aa20.69■□□□□ 0.9
ARFGAP1-223ENST00000550188 CHD1O14646 1710 aa20.64■□□□□ 0.9
ARFGAP1-223ENST00000550188 PBRM1Q86U86 1689 aa20.64■□□□□ 0.9
ARFGAP1-223ENST00000550188 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
ARFGAP1-223ENST00000550188 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
ARFGAP1-223ENST00000550188 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
ARFGAP1-223ENST00000550188 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
ARFGAP1-223ENST00000550188 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
ARFGAP1-223ENST00000550188 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
ARFGAP1-223ENST00000550188 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
ARFGAP1-223ENST00000550188 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
ARFGAP1-223ENST00000550188 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
ARFGAP1-223ENST00000550188 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
ARFGAP1-223ENST00000550188 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
ARFGAP1-223ENST00000550188 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
ARFGAP1-223ENST00000550188 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
ARFGAP1-223ENST00000550188 IGF1RP08069 1367 aa20.4■□□□□ 0.86
ARFGAP1-223ENST00000550188 NUP160Q12769 1436 aa20.4■□□□□ 0.86
ARFGAP1-223ENST00000550188 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
ARFGAP1-223ENST00000550188 CUL7Q14999 1698 aa20.34■□□□□ 0.85
ARFGAP1-223ENST00000550188 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
ARFGAP1-223ENST00000550188 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
ARFGAP1-223ENST00000550188 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.84
ARFGAP1-223ENST00000550188 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
ARFGAP1-223ENST00000550188 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
ARFGAP1-223ENST00000550188 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
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