Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 AL139099.5-201ENST00000635274 300 ntBASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 AC004923.1-202ENST00000642106 209 ntBASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH19Q8TAB3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 AC105206.1-202ENST00000314927 2368 ntBASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 DPM3-202ENST00000368399 517 ntBASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 SNORD3B-2-202ENST00000571722 791 ntBASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 AC090164.2-201ENST00000611487 516 ntBASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH19Q8TAB3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 LINC00115-201ENST00000473798 1317 ntBASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 AC078875.1-201ENST00000431907 724 ntBASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 RN7SL163P-201ENST00000583100 276 ntBASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH19Q8TAB3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms