RNA–Protein interactions for RNA: ENST00000560780.1

PATL2-208, Transcript of PAT1 homolog 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PATL2, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL2-208ENST00000560780 NISCHQ9Y2I1 1504 aa30.05■■■□□ 2.4
PATL2-208ENST00000560780 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
PATL2-208ENST00000560780 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
PATL2-208ENST00000560780 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
PATL2-208ENST00000560780 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
PATL2-208ENST00000560780 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
PATL2-208ENST00000560780 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
PATL2-208ENST00000560780 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
PATL2-208ENST00000560780 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
PATL2-208ENST00000560780 ABCC9O60706 1549 aa24.03■■□□□ 1.44
PATL2-208ENST00000560780 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
PATL2-208ENST00000560780 NACADO15069 1562 aa23.79■■□□□ 1.4
PATL2-208ENST00000560780 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
PATL2-208ENST00000560780 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
PATL2-208ENST00000560780 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
PATL2-208ENST00000560780 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
PATL2-208ENST00000560780 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
PATL2-208ENST00000560780 HRCP23327 699 aa23.19■■□□□ 1.3
PATL2-208ENST00000560780 WIZO95785 1651 aa23.17■■□□□ 1.3
PATL2-208ENST00000560780 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
PATL2-208ENST00000560780 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
PATL2-208ENST00000560780 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
PATL2-208ENST00000560780 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
PATL2-208ENST00000560780 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
PATL2-208ENST00000560780 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
PATL2-208ENST00000560780 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
PATL2-208ENST00000560780 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
PATL2-208ENST00000560780 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
PATL2-208ENST00000560780 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
PATL2-208ENST00000560780 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
PATL2-208ENST00000560780 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
PATL2-208ENST00000560780 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
PATL2-208ENST00000560780 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
PATL2-208ENST00000560780 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
PATL2-208ENST00000560780 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
PATL2-208ENST00000560780 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
PATL2-208ENST00000560780 EEA1Q15075 1411 aa22.39■■□□□ 1.17
PATL2-208ENST00000560780 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
PATL2-208ENST00000560780 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
PATL2-208ENST00000560780 SOGA1O94964 1423 aa22.27■■□□□ 1.16
PATL2-208ENST00000560780 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
PATL2-208ENST00000560780 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
PATL2-208ENST00000560780 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
PATL2-208ENST00000560780 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
PATL2-208ENST00000560780 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
PATL2-208ENST00000560780 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
PATL2-208ENST00000560780 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
PATL2-208ENST00000560780 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
PATL2-208ENST00000560780 KIF21BO75037 1637 aa22.1■■□□□ 1.13
PATL2-208ENST00000560780 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
PATL2-208ENST00000560780 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
PATL2-208ENST00000560780 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
PATL2-208ENST00000560780 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
PATL2-208ENST00000560780 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
PATL2-208ENST00000560780 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
PATL2-208ENST00000560780 CLIP1P30622 1438 aa21.81■■□□□ 1.08
PATL2-208ENST00000560780 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PATL2-208ENST00000560780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
PATL2-208ENST00000560780 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
PATL2-208ENST00000560780 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
PATL2-208ENST00000560780 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
PATL2-208ENST00000560780 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
PATL2-208ENST00000560780 CFTRP13569 1480 aa21.71■■□□□ 1.07
PATL2-208ENST00000560780 CUX1P39880 1505 aa21.71■■□□□ 1.07
PATL2-208ENST00000560780 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
PATL2-208ENST00000560780 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
PATL2-208ENST00000560780 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
PATL2-208ENST00000560780 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
PATL2-208ENST00000560780 APLP2Q06481 763 aa21.52■■□□□ 1.03
PATL2-208ENST00000560780 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
PATL2-208ENST00000560780 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
PATL2-208ENST00000560780 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
PATL2-208ENST00000560780 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
PATL2-208ENST00000560780 CUX2O14529 1486 aa21.34■■□□□ 1.01
PATL2-208ENST00000560780 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
PATL2-208ENST00000560780 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
PATL2-208ENST00000560780 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
PATL2-208ENST00000560780 IGF1RP08069 1367 aa21.29■■□□□ 1
PATL2-208ENST00000560780 RRBP1Q9P2E9 1410 aaKnown RBP21.26■□□□□ 0.99
PATL2-208ENST00000560780 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
PATL2-208ENST00000560780 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
PATL2-208ENST00000560780 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
PATL2-208ENST00000560780 MAP3K1Q13233 1512 aa21.22■□□□□ 0.99
PATL2-208ENST00000560780 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
PATL2-208ENST00000560780 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
PATL2-208ENST00000560780 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
PATL2-208ENST00000560780 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
PATL2-208ENST00000560780 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
PATL2-208ENST00000560780 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.98
PATL2-208ENST00000560780 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
PATL2-208ENST00000560780 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
PATL2-208ENST00000560780 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
PATL2-208ENST00000560780 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
PATL2-208ENST00000560780 CUL7Q14999 1698 aa21.1■□□□□ 0.97
PATL2-208ENST00000560780 CFAP43Q8NDM7 1665 aa21.1■□□□□ 0.97
PATL2-208ENST00000560780 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
PATL2-208ENST00000560780 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
PATL2-208ENST00000560780 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
PATL2-208ENST00000560780 LAMC3Q9Y6N6 1575 aa21.07■□□□□ 0.96
PATL2-208ENST00000560780 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms