RNA–Protein interactions for RNA: ENST00000367393.7

C1orf53-201, Transcript of chromosome 1 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf53, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-201ENST00000367393 NISCHQ9Y2I1 1504 aa35.68■■■■□ 3.3
C1orf53-201ENST00000367393 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
C1orf53-201ENST00000367393 ABCC9O60706 1549 aa31.26■■■□□ 2.59
C1orf53-201ENST00000367393 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
C1orf53-201ENST00000367393 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
C1orf53-201ENST00000367393 NACADO15069 1562 aa29.92■■■□□ 2.38
C1orf53-201ENST00000367393 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
C1orf53-201ENST00000367393 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
C1orf53-201ENST00000367393 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
C1orf53-201ENST00000367393 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
C1orf53-201ENST00000367393 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.3
C1orf53-201ENST00000367393 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
C1orf53-201ENST00000367393 BICRAQ9NZM4 1560 aa29.1■■■□□ 2.25
C1orf53-201ENST00000367393 SCRIBQ14160 1630 aa29■■■□□ 2.23
C1orf53-201ENST00000367393 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
C1orf53-201ENST00000367393 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
C1orf53-201ENST00000367393 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
C1orf53-201ENST00000367393 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
C1orf53-201ENST00000367393 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
C1orf53-201ENST00000367393 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
C1orf53-201ENST00000367393 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
C1orf53-201ENST00000367393 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
C1orf53-201ENST00000367393 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
C1orf53-201ENST00000367393 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
C1orf53-201ENST00000367393 SMARCA2P51531 1590 aa27.56■■■□□ 2
C1orf53-201ENST00000367393 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
C1orf53-201ENST00000367393 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
C1orf53-201ENST00000367393 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
C1orf53-201ENST00000367393 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
C1orf53-201ENST00000367393 WIZO95785 1651 aa27.24■■□□□ 1.95
C1orf53-201ENST00000367393 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
C1orf53-201ENST00000367393 NESP48681 1621 aa27.01■■□□□ 1.92
C1orf53-201ENST00000367393 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
C1orf53-201ENST00000367393 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
C1orf53-201ENST00000367393 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
C1orf53-201ENST00000367393 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
C1orf53-201ENST00000367393 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
C1orf53-201ENST00000367393 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
C1orf53-201ENST00000367393 CUX2O14529 1486 aa26.69■■□□□ 1.86
C1orf53-201ENST00000367393 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
C1orf53-201ENST00000367393 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
C1orf53-201ENST00000367393 CFTRP13569 1480 aa26.61■■□□□ 1.85
C1orf53-201ENST00000367393 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
C1orf53-201ENST00000367393 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
C1orf53-201ENST00000367393 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
C1orf53-201ENST00000367393 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
C1orf53-201ENST00000367393 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
C1orf53-201ENST00000367393 WDR62O43379 1518 aa26.36■■□□□ 1.81
C1orf53-201ENST00000367393 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
C1orf53-201ENST00000367393 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
C1orf53-201ENST00000367393 TOPBP1Q92547 1522 aa26.06■■□□□ 1.76
C1orf53-201ENST00000367393 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
C1orf53-201ENST00000367393 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
C1orf53-201ENST00000367393 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
C1orf53-201ENST00000367393 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
C1orf53-201ENST00000367393 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
C1orf53-201ENST00000367393 CUX1P39880 1505 aa25.81■■□□□ 1.72
C1orf53-201ENST00000367393 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
C1orf53-201ENST00000367393 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
C1orf53-201ENST00000367393 SOGA1O94964 1423 aa25.74■■□□□ 1.71
C1orf53-201ENST00000367393 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
C1orf53-201ENST00000367393 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.71
C1orf53-201ENST00000367393 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.7
C1orf53-201ENST00000367393 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
C1orf53-201ENST00000367393 TDRD9Q8NDG6 1382 aaKnown RBP25.61■■□□□ 1.69
C1orf53-201ENST00000367393 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
C1orf53-201ENST00000367393 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
C1orf53-201ENST00000367393 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
C1orf53-201ENST00000367393 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
C1orf53-201ENST00000367393 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
C1orf53-201ENST00000367393 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
C1orf53-201ENST00000367393 CHD1O14646 1710 aa25.46■■□□□ 1.67
C1orf53-201ENST00000367393 FBLN2P98095 1184 aa25.44■■□□□ 1.66
C1orf53-201ENST00000367393 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
C1orf53-201ENST00000367393 GAPVD1Q14C86 1478 aa25.43■■□□□ 1.66
C1orf53-201ENST00000367393 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
C1orf53-201ENST00000367393 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
C1orf53-201ENST00000367393 PBRM1Q86U86 1689 aa25.4■■□□□ 1.66
C1orf53-201ENST00000367393 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
C1orf53-201ENST00000367393 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
C1orf53-201ENST00000367393 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
C1orf53-201ENST00000367393 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
C1orf53-201ENST00000367393 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
C1orf53-201ENST00000367393 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
C1orf53-201ENST00000367393 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
C1orf53-201ENST00000367393 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
C1orf53-201ENST00000367393 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
C1orf53-201ENST00000367393 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
C1orf53-201ENST00000367393 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
C1orf53-201ENST00000367393 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
C1orf53-201ENST00000367393 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
C1orf53-201ENST00000367393 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
C1orf53-201ENST00000367393 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
C1orf53-201ENST00000367393 IGF1RP08069 1367 aa25.01■■□□□ 1.59
C1orf53-201ENST00000367393 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
C1orf53-201ENST00000367393 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
C1orf53-201ENST00000367393 NUP160Q12769 1436 aa24.98■■□□□ 1.59
C1orf53-201ENST00000367393 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
C1orf53-201ENST00000367393 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
C1orf53-201ENST00000367393 CUL7Q14999 1698 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms