RNA–Protein interactions for RNA: ENST00000396703.5

UBE2E2-202, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E2, Length 2,748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-202ENST00000396703 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
UBE2E2-202ENST00000396703 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
UBE2E2-202ENST00000396703 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
UBE2E2-202ENST00000396703 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
UBE2E2-202ENST00000396703 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
UBE2E2-202ENST00000396703 ABCC9O60706 1549 aa25.73■■□□□ 1.71
UBE2E2-202ENST00000396703 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
UBE2E2-202ENST00000396703 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.65
UBE2E2-202ENST00000396703 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
UBE2E2-202ENST00000396703 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
UBE2E2-202ENST00000396703 NACADO15069 1562 aa25.02■■□□□ 1.6
UBE2E2-202ENST00000396703 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
UBE2E2-202ENST00000396703 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
UBE2E2-202ENST00000396703 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
UBE2E2-202ENST00000396703 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
UBE2E2-202ENST00000396703 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.49
UBE2E2-202ENST00000396703 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
UBE2E2-202ENST00000396703 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.47
UBE2E2-202ENST00000396703 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
UBE2E2-202ENST00000396703 WIZO95785 1651 aa24.1■■□□□ 1.45
UBE2E2-202ENST00000396703 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
UBE2E2-202ENST00000396703 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
UBE2E2-202ENST00000396703 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
UBE2E2-202ENST00000396703 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
UBE2E2-202ENST00000396703 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
UBE2E2-202ENST00000396703 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
UBE2E2-202ENST00000396703 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
UBE2E2-202ENST00000396703 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
UBE2E2-202ENST00000396703 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
UBE2E2-202ENST00000396703 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.35
UBE2E2-202ENST00000396703 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
UBE2E2-202ENST00000396703 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
UBE2E2-202ENST00000396703 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
UBE2E2-202ENST00000396703 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
UBE2E2-202ENST00000396703 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
UBE2E2-202ENST00000396703 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
UBE2E2-202ENST00000396703 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.28
UBE2E2-202ENST00000396703 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
UBE2E2-202ENST00000396703 SOGA1O94964 1423 aa22.98■■□□□ 1.27
UBE2E2-202ENST00000396703 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
UBE2E2-202ENST00000396703 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
UBE2E2-202ENST00000396703 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
UBE2E2-202ENST00000396703 CFTRP13569 1480 aa22.8■■□□□ 1.24
UBE2E2-202ENST00000396703 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
UBE2E2-202ENST00000396703 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
UBE2E2-202ENST00000396703 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
UBE2E2-202ENST00000396703 NESP48681 1621 aa22.68■■□□□ 1.22
UBE2E2-202ENST00000396703 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
UBE2E2-202ENST00000396703 CUX1P39880 1505 aa22.65■■□□□ 1.22
UBE2E2-202ENST00000396703 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
UBE2E2-202ENST00000396703 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
UBE2E2-202ENST00000396703 EEA1Q15075 1411 aa22.57■■□□□ 1.2
UBE2E2-202ENST00000396703 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
UBE2E2-202ENST00000396703 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
UBE2E2-202ENST00000396703 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
UBE2E2-202ENST00000396703 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
UBE2E2-202ENST00000396703 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.18
UBE2E2-202ENST00000396703 GOLGA3Q08378 1498 aa22.45■■□□□ 1.18
UBE2E2-202ENST00000396703 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
UBE2E2-202ENST00000396703 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
UBE2E2-202ENST00000396703 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
UBE2E2-202ENST00000396703 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
UBE2E2-202ENST00000396703 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
UBE2E2-202ENST00000396703 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
UBE2E2-202ENST00000396703 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
UBE2E2-202ENST00000396703 CUX2O14529 1486 aa22.35■■□□□ 1.17
UBE2E2-202ENST00000396703 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
UBE2E2-202ENST00000396703 KIF21BO75037 1637 aa22.3■■□□□ 1.16
UBE2E2-202ENST00000396703 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
UBE2E2-202ENST00000396703 TOPBP1Q92547 1522 aa22.27■■□□□ 1.16
UBE2E2-202ENST00000396703 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
UBE2E2-202ENST00000396703 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
UBE2E2-202ENST00000396703 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
UBE2E2-202ENST00000396703 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
UBE2E2-202ENST00000396703 DNMBPQ6XZF7 1577 aa22.22■■□□□ 1.15
UBE2E2-202ENST00000396703 CLIP1P30622 1438 aa22.21■■□□□ 1.15
UBE2E2-202ENST00000396703 IGF1RP08069 1367 aa22.21■■□□□ 1.15
UBE2E2-202ENST00000396703 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
UBE2E2-202ENST00000396703 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
UBE2E2-202ENST00000396703 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
UBE2E2-202ENST00000396703 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
UBE2E2-202ENST00000396703 HRCP23327 699 aa22.06■■□□□ 1.12
UBE2E2-202ENST00000396703 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
UBE2E2-202ENST00000396703 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
UBE2E2-202ENST00000396703 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
UBE2E2-202ENST00000396703 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
UBE2E2-202ENST00000396703 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
UBE2E2-202ENST00000396703 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
UBE2E2-202ENST00000396703 APLP2Q06481 763 aa21.93■■□□□ 1.1
UBE2E2-202ENST00000396703 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
UBE2E2-202ENST00000396703 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
UBE2E2-202ENST00000396703 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
UBE2E2-202ENST00000396703 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
UBE2E2-202ENST00000396703 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
UBE2E2-202ENST00000396703 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
UBE2E2-202ENST00000396703 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
UBE2E2-202ENST00000396703 KANK4Q5T7N3 995 aaPredicted RBP21.8■■□□□ 1.08
UBE2E2-202ENST00000396703 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
UBE2E2-202ENST00000396703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
UBE2E2-202ENST00000396703 CUL7Q14999 1698 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms