RNA–Protein interactions for RNA: ENST00000529655.5

ATG13-215, Transcript of autophagy related 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATG13, Length 2,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-215ENST00000529655 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
ATG13-215ENST00000529655 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
ATG13-215ENST00000529655 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
ATG13-215ENST00000529655 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
ATG13-215ENST00000529655 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.56
ATG13-215ENST00000529655 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
ATG13-215ENST00000529655 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
ATG13-215ENST00000529655 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
ATG13-215ENST00000529655 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
ATG13-215ENST00000529655 ABCC9O60706 1549 aa23.61■■□□□ 1.37
ATG13-215ENST00000529655 SCRIBQ14160 1630 aa23.58■■□□□ 1.37
ATG13-215ENST00000529655 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
ATG13-215ENST00000529655 PCGF6Q9BYE7 350 aa23.37■■□□□ 1.33
ATG13-215ENST00000529655 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
ATG13-215ENST00000529655 HRCP23327 699 aa23.27■■□□□ 1.32
ATG13-215ENST00000529655 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
ATG13-215ENST00000529655 NACADO15069 1562 aa23.12■■□□□ 1.29
ATG13-215ENST00000529655 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
ATG13-215ENST00000529655 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
ATG13-215ENST00000529655 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
ATG13-215ENST00000529655 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
ATG13-215ENST00000529655 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
ATG13-215ENST00000529655 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
ATG13-215ENST00000529655 WIZO95785 1651 aa22.87■■□□□ 1.25
ATG13-215ENST00000529655 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
ATG13-215ENST00000529655 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
ATG13-215ENST00000529655 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
ATG13-215ENST00000529655 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATG13-215ENST00000529655 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
ATG13-215ENST00000529655 SMARCA4P51532 1647 aa22.45■■□□□ 1.18
ATG13-215ENST00000529655 TOP2AP11388 1531 aaKnown RBP22.42■■□□□ 1.18
ATG13-215ENST00000529655 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.18
ATG13-215ENST00000529655 ABCC8Q09428 1581 aa22.39■■□□□ 1.17
ATG13-215ENST00000529655 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
ATG13-215ENST00000529655 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
ATG13-215ENST00000529655 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
ATG13-215ENST00000529655 SOGA1O94964 1423 aa22.17■■□□□ 1.14
ATG13-215ENST00000529655 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
ATG13-215ENST00000529655 RUSC2Q8N2Y8 1516 aa22.09■■□□□ 1.13
ATG13-215ENST00000529655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
ATG13-215ENST00000529655 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
ATG13-215ENST00000529655 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
ATG13-215ENST00000529655 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
ATG13-215ENST00000529655 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.1
ATG13-215ENST00000529655 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
ATG13-215ENST00000529655 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
ATG13-215ENST00000529655 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
ATG13-215ENST00000529655 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.1
ATG13-215ENST00000529655 EEA1Q15075 1411 aa21.89■■□□□ 1.09
ATG13-215ENST00000529655 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
ATG13-215ENST00000529655 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
ATG13-215ENST00000529655 GOLGA3Q08378 1498 aa21.82■■□□□ 1.08
ATG13-215ENST00000529655 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
ATG13-215ENST00000529655 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
ATG13-215ENST00000529655 KIF21BO75037 1637 aa21.63■■□□□ 1.05
ATG13-215ENST00000529655 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
ATG13-215ENST00000529655 CLIP1P30622 1438 aa21.61■■□□□ 1.05
ATG13-215ENST00000529655 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
ATG13-215ENST00000529655 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
ATG13-215ENST00000529655 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
ATG13-215ENST00000529655 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
ATG13-215ENST00000529655 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
ATG13-215ENST00000529655 APLP2Q06481 763 aa21.43■■□□□ 1.02
ATG13-215ENST00000529655 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
ATG13-215ENST00000529655 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
ATG13-215ENST00000529655 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
ATG13-215ENST00000529655 CUX1P39880 1505 aa21.37■■□□□ 1.01
ATG13-215ENST00000529655 PRXQ9BXM0 1461 aa21.32■■□□□ 1
ATG13-215ENST00000529655 NEUROD1Q13562 356 aa21.28■■□□□ 1
ATG13-215ENST00000529655 CFTRP13569 1480 aa21.27■■□□□ 1
ATG13-215ENST00000529655 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
ATG13-215ENST00000529655 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
ATG13-215ENST00000529655 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
ATG13-215ENST00000529655 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
ATG13-215ENST00000529655 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
ATG13-215ENST00000529655 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
ATG13-215ENST00000529655 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
ATG13-215ENST00000529655 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
ATG13-215ENST00000529655 CUX2O14529 1486 aa21.1■□□□□ 0.97
ATG13-215ENST00000529655 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.97
ATG13-215ENST00000529655 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
ATG13-215ENST00000529655 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
ATG13-215ENST00000529655 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
ATG13-215ENST00000529655 IGF1RP08069 1367 aa21.05■□□□□ 0.96
ATG13-215ENST00000529655 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
ATG13-215ENST00000529655 MIER1Q8N108 512 aa21.04■□□□□ 0.96
ATG13-215ENST00000529655 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
ATG13-215ENST00000529655 DHX57Q6P158 1386 aaKnown RBP21.01■□□□□ 0.95
ATG13-215ENST00000529655 ITGAEP38570 1179 aa21.01■□□□□ 0.95
ATG13-215ENST00000529655 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
ATG13-215ENST00000529655 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
ATG13-215ENST00000529655 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
ATG13-215ENST00000529655 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
ATG13-215ENST00000529655 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
ATG13-215ENST00000529655 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
ATG13-215ENST00000529655 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
ATG13-215ENST00000529655 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
ATG13-215ENST00000529655 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
ATG13-215ENST00000529655 NESP48681 1621 aa20.82■□□□□ 0.92
ATG13-215ENST00000529655 TIAM1Q13009 1591 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms