RNA–Protein interactions for RNA: ENST00000341776.6

JARID2-201, Transcript of jumonji and AT-rich interaction domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene JARID2, Length 5,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JARID2-201ENST00000341776 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
JARID2-201ENST00000341776 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
JARID2-201ENST00000341776 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
JARID2-201ENST00000341776 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
JARID2-201ENST00000341776 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
JARID2-201ENST00000341776 APLP2Q06481 763 aa23.24■■□□□ 1.31
JARID2-201ENST00000341776 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
JARID2-201ENST00000341776 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
JARID2-201ENST00000341776 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
JARID2-201ENST00000341776 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
JARID2-201ENST00000341776 ZEB1P37275 1124 aaPredicted RBP22.71■■□□□ 1.23
JARID2-201ENST00000341776 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
JARID2-201ENST00000341776 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
JARID2-201ENST00000341776 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
JARID2-201ENST00000341776 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
JARID2-201ENST00000341776 CENPBP07199 599 aaPredicted RBP22.35■■□□□ 1.17
JARID2-201ENST00000341776 ABCC9O60706 1549 aa22.3■■□□□ 1.16
JARID2-201ENST00000341776 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
JARID2-201ENST00000341776 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
JARID2-201ENST00000341776 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
JARID2-201ENST00000341776 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
JARID2-201ENST00000341776 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
JARID2-201ENST00000341776 HRCP23327 699 aa21.82■■□□□ 1.08
JARID2-201ENST00000341776 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
JARID2-201ENST00000341776 NEFLP07196 543 aa21.8■■□□□ 1.08
JARID2-201ENST00000341776 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
JARID2-201ENST00000341776 YTHDC1Q96MU7 727 aaKnown RBP21.66■■□□□ 1.06
JARID2-201ENST00000341776 ITGAEP38570 1179 aa21.56■■□□□ 1.04
JARID2-201ENST00000341776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
JARID2-201ENST00000341776 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
JARID2-201ENST00000341776 MYT1Q01538 1121 aa21.37■■□□□ 1.01
JARID2-201ENST00000341776 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
JARID2-201ENST00000341776 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
JARID2-201ENST00000341776 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
JARID2-201ENST00000341776 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
JARID2-201ENST00000341776 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
JARID2-201ENST00000341776 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
JARID2-201ENST00000341776 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
JARID2-201ENST00000341776 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
JARID2-201ENST00000341776 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
JARID2-201ENST00000341776 TRIM52Q96A61 297 aa21.02■□□□□ 0.95
JARID2-201ENST00000341776 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
JARID2-201ENST00000341776 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
JARID2-201ENST00000341776 FBLN2P98095 1184 aa20.83■□□□□ 0.92
JARID2-201ENST00000341776 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
JARID2-201ENST00000341776 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
JARID2-201ENST00000341776 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
JARID2-201ENST00000341776 ANP32CO43423 234 aa20.8■□□□□ 0.92
JARID2-201ENST00000341776 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
JARID2-201ENST00000341776 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
JARID2-201ENST00000341776 CDK11AQ9UQ88 783 aaPredicted RBP20.68■□□□□ 0.9
JARID2-201ENST00000341776 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
JARID2-201ENST00000341776 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
JARID2-201ENST00000341776 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
JARID2-201ENST00000341776 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
JARID2-201ENST00000341776 NACADO15069 1562 aa20.53■□□□□ 0.88
JARID2-201ENST00000341776 EEA1Q15075 1411 aa20.48■□□□□ 0.87
JARID2-201ENST00000341776 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
JARID2-201ENST00000341776 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
JARID2-201ENST00000341776 ZNF777Q9ULD5 760 aaPredicted RBP20.46■□□□□ 0.87
JARID2-201ENST00000341776 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
JARID2-201ENST00000341776 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
JARID2-201ENST00000341776 BCANQ96GW7 911 aa20.41■□□□□ 0.86
JARID2-201ENST00000341776 CLIP1P30622 1438 aa20.36■□□□□ 0.85
JARID2-201ENST00000341776 GOLGA3Q08378 1498 aa20.33■□□□□ 0.84
JARID2-201ENST00000341776 NEFMP07197 916 aa20.32■□□□□ 0.84
JARID2-201ENST00000341776 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
JARID2-201ENST00000341776 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
JARID2-201ENST00000341776 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
JARID2-201ENST00000341776 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.839e-6■■■■■ 50.1
JARID2-201ENST00000341776 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
JARID2-201ENST00000341776 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
JARID2-201ENST00000341776 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
JARID2-201ENST00000341776 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
JARID2-201ENST00000341776 NPM1P06748 294 aaKnown RBP eCLIP20.19■□□□□ 0.82
JARID2-201ENST00000341776 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
JARID2-201ENST00000341776 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
JARID2-201ENST00000341776 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
JARID2-201ENST00000341776 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
JARID2-201ENST00000341776 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
JARID2-201ENST00000341776 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
JARID2-201ENST00000341776 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
JARID2-201ENST00000341776 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
JARID2-201ENST00000341776 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
JARID2-201ENST00000341776 ANP32AP39687 249 aaKnown RBP20.1■□□□□ 0.81
JARID2-201ENST00000341776 HNRNPUQ00839 825 aaKnown RBP eCLIP20.08■□□□□ 0.81
JARID2-201ENST00000341776 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
JARID2-201ENST00000341776 FKBP8Q14318 412 aa20.04■□□□□ 0.8
JARID2-201ENST00000341776 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
JARID2-201ENST00000341776 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
JARID2-201ENST00000341776 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
JARID2-201ENST00000341776 SLC24A1O60721 1099 aa20■□□□□ 0.79
JARID2-201ENST00000341776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.794e-8■■□□□ 11.9
JARID2-201ENST00000341776 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
JARID2-201ENST00000341776 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
JARID2-201ENST00000341776 EIF4G2P78344 907 aaKnown RBP eCLIP19.95■□□□□ 0.783e-7■■■■■ 34.5
JARID2-201ENST00000341776 PLEKHD1A6NEE1 506 aa19.93■□□□□ 0.78
JARID2-201ENST00000341776 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
JARID2-201ENST00000341776 MRS2Q9HD23 443 aa19.91■□□□□ 0.78
JARID2-201ENST00000341776 RRP7BPQ9NSQ0 103 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms