RNA–Protein interactions for RNA: ENST00000443967.5

SIMC1-205, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-205ENST00000443967 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
SIMC1-205ENST00000443967 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
SIMC1-205ENST00000443967 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
SIMC1-205ENST00000443967 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
SIMC1-205ENST00000443967 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
SIMC1-205ENST00000443967 MYT1Q01538 1121 aa24.02■■□□□ 1.44
SIMC1-205ENST00000443967 HRCP23327 699 aa23.87■■□□□ 1.41
SIMC1-205ENST00000443967 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
SIMC1-205ENST00000443967 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
SIMC1-205ENST00000443967 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
SIMC1-205ENST00000443967 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
SIMC1-205ENST00000443967 ABCC9O60706 1549 aa23.6■■□□□ 1.37
SIMC1-205ENST00000443967 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
SIMC1-205ENST00000443967 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
SIMC1-205ENST00000443967 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.34
SIMC1-205ENST00000443967 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
SIMC1-205ENST00000443967 SCAF1Q9H7N4 1312 aaKnown RBP23.3■■□□□ 1.32
SIMC1-205ENST00000443967 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
SIMC1-205ENST00000443967 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
SIMC1-205ENST00000443967 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
SIMC1-205ENST00000443967 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
SIMC1-205ENST00000443967 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
SIMC1-205ENST00000443967 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
SIMC1-205ENST00000443967 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
SIMC1-205ENST00000443967 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
SIMC1-205ENST00000443967 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
SIMC1-205ENST00000443967 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
SIMC1-205ENST00000443967 PRKCSHP14314 528 aaPredicted RBP22.46■■□□□ 1.19
SIMC1-205ENST00000443967 ACIN1Q9UKV3 1341 aaKnown RBP22.4■■□□□ 1.18
SIMC1-205ENST00000443967 CENPBP07199 599 aaPredicted RBP22.39■■□□□ 1.17
SIMC1-205ENST00000443967 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
SIMC1-205ENST00000443967 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
SIMC1-205ENST00000443967 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
SIMC1-205ENST00000443967 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
SIMC1-205ENST00000443967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
SIMC1-205ENST00000443967 CCER1Q8TC90 406 aaPredicted RBP22.17■■□□□ 1.14
SIMC1-205ENST00000443967 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
SIMC1-205ENST00000443967 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
SIMC1-205ENST00000443967 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
SIMC1-205ENST00000443967 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
SIMC1-205ENST00000443967 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
SIMC1-205ENST00000443967 WIZO95785 1651 aa21.92■■□□□ 1.1
SIMC1-205ENST00000443967 NACADO15069 1562 aa21.84■■□□□ 1.09
SIMC1-205ENST00000443967 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
SIMC1-205ENST00000443967 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SIMC1-205ENST00000443967 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
SIMC1-205ENST00000443967 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SIMC1-205ENST00000443967 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
SIMC1-205ENST00000443967 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
SIMC1-205ENST00000443967 SOGA1O94964 1423 aa21.6■■□□□ 1.05
SIMC1-205ENST00000443967 APLP2Q06481 763 aa21.59■■□□□ 1.05
SIMC1-205ENST00000443967 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
SIMC1-205ENST00000443967 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
SIMC1-205ENST00000443967 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
SIMC1-205ENST00000443967 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
SIMC1-205ENST00000443967 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
SIMC1-205ENST00000443967 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
SIMC1-205ENST00000443967 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
SIMC1-205ENST00000443967 SMARCA2P51531 1590 aa21.3■■□□□ 1
SIMC1-205ENST00000443967 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
SIMC1-205ENST00000443967 ITGAEP38570 1179 aa21.24■□□□□ 0.99
SIMC1-205ENST00000443967 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SIMC1-205ENST00000443967 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
SIMC1-205ENST00000443967 ANO8Q9HCE9 1232 aaPredicted RBP21.2■□□□□ 0.98
SIMC1-205ENST00000443967 CLIP1P30622 1438 aa21.17■□□□□ 0.98
SIMC1-205ENST00000443967 EEA1Q15075 1411 aa21.16■□□□□ 0.98
SIMC1-205ENST00000443967 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
SIMC1-205ENST00000443967 MIER1Q8N108 512 aa21.13■□□□□ 0.97
SIMC1-205ENST00000443967 TSHZ2Q9NRE2 1034 aa21.12■□□□□ 0.97
SIMC1-205ENST00000443967 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
SIMC1-205ENST00000443967 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
SIMC1-205ENST00000443967 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
SIMC1-205ENST00000443967 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
SIMC1-205ENST00000443967 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.95
SIMC1-205ENST00000443967 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
SIMC1-205ENST00000443967 BCANQ96GW7 911 aa21■□□□□ 0.95
SIMC1-205ENST00000443967 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
SIMC1-205ENST00000443967 SYNJ1O43426 1573 aa20.94■□□□□ 0.94
SIMC1-205ENST00000443967 SUPT16HQ9Y5B9 1047 aaKnown RBP20.94■□□□□ 0.94
SIMC1-205ENST00000443967 VPS8Q8N3P4 1428 aa20.91■□□□□ 0.94
SIMC1-205ENST00000443967 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
SIMC1-205ENST00000443967 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
SIMC1-205ENST00000443967 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
SIMC1-205ENST00000443967 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
SIMC1-205ENST00000443967 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
SIMC1-205ENST00000443967 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
SIMC1-205ENST00000443967 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
SIMC1-205ENST00000443967 KIF21BO75037 1637 aa20.7■□□□□ 0.9
SIMC1-205ENST00000443967 RTN4Q9NQC3 1192 aaKnown RBP20.66■□□□□ 0.9
SIMC1-205ENST00000443967 DEKP35659 375 aaKnown RBP20.65■□□□□ 0.9
SIMC1-205ENST00000443967 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.89
SIMC1-205ENST00000443967 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
SIMC1-205ENST00000443967 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
SIMC1-205ENST00000443967 DHX57Q6P158 1386 aaKnown RBP20.61■□□□□ 0.89
SIMC1-205ENST00000443967 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
SIMC1-205ENST00000443967 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
SIMC1-205ENST00000443967 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
SIMC1-205ENST00000443967 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
SIMC1-205ENST00000443967 SIN3AQ96ST3 1273 aa20.54■□□□□ 0.88
SIMC1-205ENST00000443967 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms