RNA–Protein interactions for RNA: ENST00000373324.8

LRSAM1-204, Transcript of leucine rich repeat and sterile alpha motif containing 1, humanhuman

TSL 2 BASIC

Gene LRSAM1, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1-204ENST00000373324 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
LRSAM1-204ENST00000373324 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
LRSAM1-204ENST00000373324 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
LRSAM1-204ENST00000373324 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
LRSAM1-204ENST00000373324 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
LRSAM1-204ENST00000373324 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
LRSAM1-204ENST00000373324 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
LRSAM1-204ENST00000373324 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
LRSAM1-204ENST00000373324 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
LRSAM1-204ENST00000373324 PCGF6Q9BYE7 350 aa23.41■■□□□ 1.34
LRSAM1-204ENST00000373324 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
LRSAM1-204ENST00000373324 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
LRSAM1-204ENST00000373324 ABCC9O60706 1549 aa23.36■■□□□ 1.33
LRSAM1-204ENST00000373324 HRCP23327 699 aa23.33■■□□□ 1.33
LRSAM1-204ENST00000373324 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
LRSAM1-204ENST00000373324 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
LRSAM1-204ENST00000373324 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
LRSAM1-204ENST00000373324 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
LRSAM1-204ENST00000373324 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
LRSAM1-204ENST00000373324 NACADO15069 1562 aa22.92■■□□□ 1.26
LRSAM1-204ENST00000373324 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
LRSAM1-204ENST00000373324 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
LRSAM1-204ENST00000373324 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
LRSAM1-204ENST00000373324 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
LRSAM1-204ENST00000373324 WIZO95785 1651 aa22.68■■□□□ 1.22
LRSAM1-204ENST00000373324 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
LRSAM1-204ENST00000373324 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
LRSAM1-204ENST00000373324 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
LRSAM1-204ENST00000373324 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
LRSAM1-204ENST00000373324 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
LRSAM1-204ENST00000373324 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
LRSAM1-204ENST00000373324 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
LRSAM1-204ENST00000373324 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.153e-6■■■□□ 15.4
LRSAM1-204ENST00000373324 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
LRSAM1-204ENST00000373324 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
LRSAM1-204ENST00000373324 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
LRSAM1-204ENST00000373324 SOGA1O94964 1423 aa22.07■■□□□ 1.12
LRSAM1-204ENST00000373324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
LRSAM1-204ENST00000373324 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
LRSAM1-204ENST00000373324 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
LRSAM1-204ENST00000373324 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
LRSAM1-204ENST00000373324 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
LRSAM1-204ENST00000373324 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.11
LRSAM1-204ENST00000373324 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
LRSAM1-204ENST00000373324 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
LRSAM1-204ENST00000373324 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
LRSAM1-204ENST00000373324 EEA1Q15075 1411 aa21.84■■□□□ 1.09
LRSAM1-204ENST00000373324 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
LRSAM1-204ENST00000373324 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
LRSAM1-204ENST00000373324 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
LRSAM1-204ENST00000373324 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
LRSAM1-204ENST00000373324 SYNJ1O43426 1573 aa21.7■■□□□ 1.07
LRSAM1-204ENST00000373324 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
LRSAM1-204ENST00000373324 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
LRSAM1-204ENST00000373324 SCAF1Q9H7N4 1312 aaKnown RBP21.56■■□□□ 1.04
LRSAM1-204ENST00000373324 CLIP1P30622 1438 aa21.56■■□□□ 1.04
LRSAM1-204ENST00000373324 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
LRSAM1-204ENST00000373324 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
LRSAM1-204ENST00000373324 KIF21BO75037 1637 aa21.52■■□□□ 1.03
LRSAM1-204ENST00000373324 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
LRSAM1-204ENST00000373324 APLP2Q06481 763 aa21.47■■□□□ 1.03
LRSAM1-204ENST00000373324 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
LRSAM1-204ENST00000373324 TOP2BQ02880 1626 aa21.38■■□□□ 1.01
LRSAM1-204ENST00000373324 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
LRSAM1-204ENST00000373324 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
LRSAM1-204ENST00000373324 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
LRSAM1-204ENST00000373324 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
LRSAM1-204ENST00000373324 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
LRSAM1-204ENST00000373324 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
LRSAM1-204ENST00000373324 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
LRSAM1-204ENST00000373324 CUX1P39880 1505 aa21.21■□□□□ 0.99
LRSAM1-204ENST00000373324 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
LRSAM1-204ENST00000373324 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
LRSAM1-204ENST00000373324 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
LRSAM1-204ENST00000373324 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
LRSAM1-204ENST00000373324 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
LRSAM1-204ENST00000373324 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.97
LRSAM1-204ENST00000373324 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
LRSAM1-204ENST00000373324 CFTRP13569 1480 aa21.12■□□□□ 0.97
LRSAM1-204ENST00000373324 MIER1Q8N108 512 aa21.06■□□□□ 0.96
LRSAM1-204ENST00000373324 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
LRSAM1-204ENST00000373324 ITGAEP38570 1179 aa21■□□□□ 0.95
LRSAM1-204ENST00000373324 CUX2O14529 1486 aa20.99■□□□□ 0.95
LRSAM1-204ENST00000373324 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
LRSAM1-204ENST00000373324 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
LRSAM1-204ENST00000373324 IGF1RP08069 1367 aa20.93■□□□□ 0.94
LRSAM1-204ENST00000373324 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
LRSAM1-204ENST00000373324 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
LRSAM1-204ENST00000373324 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
LRSAM1-204ENST00000373324 CLSPNQ9HAW4 1339 aa20.88■□□□□ 0.93
LRSAM1-204ENST00000373324 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
LRSAM1-204ENST00000373324 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
LRSAM1-204ENST00000373324 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
LRSAM1-204ENST00000373324 ATP1B4Q9UN42 357 aaPredicted RBP20.81■□□□□ 0.92
LRSAM1-204ENST00000373324 PRDM2Q13029 1718 aa20.8■□□□□ 0.92
LRSAM1-204ENST00000373324 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
LRSAM1-204ENST00000373324 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
LRSAM1-204ENST00000373324 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
LRSAM1-204ENST00000373324 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
LRSAM1-204ENST00000373324 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms