RNA–Protein interactions for RNA: ENST00000304195.7

FRMD3-201, Transcript of FERM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRMD3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-201ENST00000304195 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
FRMD3-201ENST00000304195 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
FRMD3-201ENST00000304195 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
FRMD3-201ENST00000304195 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
FRMD3-201ENST00000304195 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
FRMD3-201ENST00000304195 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
FRMD3-201ENST00000304195 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
FRMD3-201ENST00000304195 APLP2Q06481 763 aa23.03■■□□□ 1.28
FRMD3-201ENST00000304195 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
FRMD3-201ENST00000304195 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
FRMD3-201ENST00000304195 PELP1Q8IZL8 1130 aaKnown RBP22.71■■□□□ 1.23
FRMD3-201ENST00000304195 RANGAP1P46060 587 aaPredicted RBP22.67■■□□□ 1.22
FRMD3-201ENST00000304195 CCER1Q8TC90 406 aaPredicted RBP22.55■■□□□ 1.2
FRMD3-201ENST00000304195 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
FRMD3-201ENST00000304195 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
FRMD3-201ENST00000304195 CENPBP07199 599 aaPredicted RBP22.35■■□□□ 1.17
FRMD3-201ENST00000304195 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
FRMD3-201ENST00000304195 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
FRMD3-201ENST00000304195 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
FRMD3-201ENST00000304195 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
FRMD3-201ENST00000304195 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
FRMD3-201ENST00000304195 HRCP23327 699 aa22.09■■□□□ 1.13
FRMD3-201ENST00000304195 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
FRMD3-201ENST00000304195 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
FRMD3-201ENST00000304195 ITGAEP38570 1179 aa21.76■■□□□ 1.07
FRMD3-201ENST00000304195 NEFLP07196 543 aa21.74■■□□□ 1.07
FRMD3-201ENST00000304195 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
FRMD3-201ENST00000304195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
FRMD3-201ENST00000304195 ABCC9O60706 1549 aa21.43■■□□□ 1.02
FRMD3-201ENST00000304195 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
FRMD3-201ENST00000304195 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
FRMD3-201ENST00000304195 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
FRMD3-201ENST00000304195 CNGB1Q14028 1251 aaPredicted RBP21.28■■□□□ 1
FRMD3-201ENST00000304195 MYT1Q01538 1121 aa21.22■□□□□ 0.99
FRMD3-201ENST00000304195 MYT1LQ9UL68 1186 aa21.19■□□□□ 0.98
FRMD3-201ENST00000304195 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
FRMD3-201ENST00000304195 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
FRMD3-201ENST00000304195 TRIM52Q96A61 297 aa20.97■□□□□ 0.95
FRMD3-201ENST00000304195 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
FRMD3-201ENST00000304195 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
FRMD3-201ENST00000304195 DAXXQ9UER7 740 aaPredicted RBP20.92■□□□□ 0.94
FRMD3-201ENST00000304195 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
FRMD3-201ENST00000304195 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
FRMD3-201ENST00000304195 BCANQ96GW7 911 aa20.82■□□□□ 0.92
FRMD3-201ENST00000304195 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
FRMD3-201ENST00000304195 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
FRMD3-201ENST00000304195 ANP32CO43423 234 aa20.75■□□□□ 0.91
FRMD3-201ENST00000304195 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
FRMD3-201ENST00000304195 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
FRMD3-201ENST00000304195 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
FRMD3-201ENST00000304195 FBLN2P98095 1184 aa20.67■□□□□ 0.9
FRMD3-201ENST00000304195 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
FRMD3-201ENST00000304195 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
FRMD3-201ENST00000304195 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
FRMD3-201ENST00000304195 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
FRMD3-201ENST00000304195 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
FRMD3-201ENST00000304195 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
FRMD3-201ENST00000304195 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
FRMD3-201ENST00000304195 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
FRMD3-201ENST00000304195 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
FRMD3-201ENST00000304195 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
FRMD3-201ENST00000304195 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
FRMD3-201ENST00000304195 FKBP8Q14318 412 aa20.28■□□□□ 0.84
FRMD3-201ENST00000304195 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
FRMD3-201ENST00000304195 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
FRMD3-201ENST00000304195 CLIP1P30622 1438 aa20.22■□□□□ 0.83
FRMD3-201ENST00000304195 MIER1Q8N108 512 aa20.2■□□□□ 0.82
FRMD3-201ENST00000304195 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
FRMD3-201ENST00000304195 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
FRMD3-201ENST00000304195 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
FRMD3-201ENST00000304195 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
FRMD3-201ENST00000304195 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
FRMD3-201ENST00000304195 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
FRMD3-201ENST00000304195 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
FRMD3-201ENST00000304195 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
FRMD3-201ENST00000304195 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.8
FRMD3-201ENST00000304195 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.8
FRMD3-201ENST00000304195 SALL2Q9Y467 1007 aaPredicted RBP20.07■□□□□ 0.8
FRMD3-201ENST00000304195 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
FRMD3-201ENST00000304195 EEA1Q15075 1411 aa20.03■□□□□ 0.8
FRMD3-201ENST00000304195 NEFMP07197 916 aa20.03■□□□□ 0.8
FRMD3-201ENST00000304195 SLC24A1O60721 1099 aa20.01■□□□□ 0.79
FRMD3-201ENST00000304195 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
FRMD3-201ENST00000304195 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
FRMD3-201ENST00000304195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
FRMD3-201ENST00000304195 RB1CC1Q8TDY2 1594 aa19.98■□□□□ 0.79
FRMD3-201ENST00000304195 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
FRMD3-201ENST00000304195 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
FRMD3-201ENST00000304195 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
FRMD3-201ENST00000304195 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
FRMD3-201ENST00000304195 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.78
FRMD3-201ENST00000304195 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
FRMD3-201ENST00000304195 TSPY10P0CW01 314 aa19.94■□□□□ 0.78
FRMD3-201ENST00000304195 IRX6P78412 446 aaPredicted RBP19.92■□□□□ 0.78
FRMD3-201ENST00000304195 CCDC136Q96JN2 1154 aa19.89■□□□□ 0.78
FRMD3-201ENST00000304195 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
FRMD3-201ENST00000304195 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
FRMD3-201ENST00000304195 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
FRMD3-201ENST00000304195 NACADO15069 1562 aa19.86■□□□□ 0.77
FRMD3-201ENST00000304195 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms