RNA–Protein interactions for RNA: ENST00000473798.1

LINC00115-201, long intergenic non-protein coding RNA 115, humanhuman

BASIC

Gene LINC00115, Length 1,317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00115-201ENST00000473798 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
LINC00115-201ENST00000473798 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
LINC00115-201ENST00000473798 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.15
LINC00115-201ENST00000473798 ABCC9O60706 1549 aa28.11■■■□□ 2.09
LINC00115-201ENST00000473798 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
LINC00115-201ENST00000473798 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
LINC00115-201ENST00000473798 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
LINC00115-201ENST00000473798 NACADO15069 1562 aa27.31■■□□□ 1.96
LINC00115-201ENST00000473798 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
LINC00115-201ENST00000473798 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
LINC00115-201ENST00000473798 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.9
LINC00115-201ENST00000473798 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
LINC00115-201ENST00000473798 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.87
LINC00115-201ENST00000473798 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
LINC00115-201ENST00000473798 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
LINC00115-201ENST00000473798 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
LINC00115-201ENST00000473798 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
LINC00115-201ENST00000473798 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
LINC00115-201ENST00000473798 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
LINC00115-201ENST00000473798 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
LINC00115-201ENST00000473798 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
LINC00115-201ENST00000473798 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
LINC00115-201ENST00000473798 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
LINC00115-201ENST00000473798 WIZO95785 1651 aa25.48■■□□□ 1.67
LINC00115-201ENST00000473798 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
LINC00115-201ENST00000473798 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
LINC00115-201ENST00000473798 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
LINC00115-201ENST00000473798 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
LINC00115-201ENST00000473798 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
LINC00115-201ENST00000473798 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
LINC00115-201ENST00000473798 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
LINC00115-201ENST00000473798 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
LINC00115-201ENST00000473798 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
LINC00115-201ENST00000473798 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.59
LINC00115-201ENST00000473798 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
LINC00115-201ENST00000473798 CFTRP13569 1480 aa24.54■■□□□ 1.52
LINC00115-201ENST00000473798 NESP48681 1621 aa24.54■■□□□ 1.52
LINC00115-201ENST00000473798 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
LINC00115-201ENST00000473798 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
LINC00115-201ENST00000473798 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
LINC00115-201ENST00000473798 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
LINC00115-201ENST00000473798 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
LINC00115-201ENST00000473798 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
LINC00115-201ENST00000473798 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
LINC00115-201ENST00000473798 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
LINC00115-201ENST00000473798 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
LINC00115-201ENST00000473798 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
LINC00115-201ENST00000473798 ERCC6Q03468 1493 aa24.14■■□□□ 1.45
LINC00115-201ENST00000473798 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
LINC00115-201ENST00000473798 CUX1P39880 1505 aa24.09■■□□□ 1.45
LINC00115-201ENST00000473798 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
LINC00115-201ENST00000473798 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
LINC00115-201ENST00000473798 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
LINC00115-201ENST00000473798 TOP2BQ02880 1626 aa24■■□□□ 1.43
LINC00115-201ENST00000473798 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
LINC00115-201ENST00000473798 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
LINC00115-201ENST00000473798 BIVM-ERCC5R4GMW8 1640 aa23.97■■□□□ 1.43
LINC00115-201ENST00000473798 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
LINC00115-201ENST00000473798 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.41
LINC00115-201ENST00000473798 WDR62O43379 1518 aa23.87■■□□□ 1.41
LINC00115-201ENST00000473798 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
LINC00115-201ENST00000473798 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
LINC00115-201ENST00000473798 SOGA1O94964 1423 aa23.77■■□□□ 1.4
LINC00115-201ENST00000473798 FAM9AQ8IZU1 332 aaPredicted RBP23.77■■□□□ 1.4
LINC00115-201ENST00000473798 CUX2O14529 1486 aa23.72■■□□□ 1.39
LINC00115-201ENST00000473798 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.38
LINC00115-201ENST00000473798 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
LINC00115-201ENST00000473798 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
LINC00115-201ENST00000473798 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
LINC00115-201ENST00000473798 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
LINC00115-201ENST00000473798 KIF27Q86VH2 1401 aa23.6■■□□□ 1.37
LINC00115-201ENST00000473798 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
LINC00115-201ENST00000473798 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
LINC00115-201ENST00000473798 EEA1Q15075 1411 aa23.55■■□□□ 1.36
LINC00115-201ENST00000473798 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
LINC00115-201ENST00000473798 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
LINC00115-201ENST00000473798 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
LINC00115-201ENST00000473798 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
LINC00115-201ENST00000473798 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
LINC00115-201ENST00000473798 IGF1RP08069 1367 aa23.45■■□□□ 1.34
LINC00115-201ENST00000473798 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
LINC00115-201ENST00000473798 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
LINC00115-201ENST00000473798 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
LINC00115-201ENST00000473798 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
LINC00115-201ENST00000473798 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
LINC00115-201ENST00000473798 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
LINC00115-201ENST00000473798 PRXQ9BXM0 1461 aa23.32■■□□□ 1.32
LINC00115-201ENST00000473798 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
LINC00115-201ENST00000473798 RAPGEF2Q9Y4G8 1499 aa23.28■■□□□ 1.32
LINC00115-201ENST00000473798 KIF21BO75037 1637 aa23.28■■□□□ 1.32
LINC00115-201ENST00000473798 CUL7Q14999 1698 aa23.26■■□□□ 1.31
LINC00115-201ENST00000473798 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
LINC00115-201ENST00000473798 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
LINC00115-201ENST00000473798 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
LINC00115-201ENST00000473798 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
LINC00115-201ENST00000473798 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
LINC00115-201ENST00000473798 FBLN2P98095 1184 aa23.16■■□□□ 1.3
LINC00115-201ENST00000473798 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
LINC00115-201ENST00000473798 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
LINC00115-201ENST00000473798 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms