RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
TMEM87A-201ENST00000307216 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
TMEM87A-201ENST00000307216 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
TMEM87A-201ENST00000307216 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
TMEM87A-201ENST00000307216 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
TMEM87A-201ENST00000307216 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
TMEM87A-201ENST00000307216 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
TMEM87A-201ENST00000307216 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
TMEM87A-201ENST00000307216 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
TMEM87A-201ENST00000307216 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
TMEM87A-201ENST00000307216 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
TMEM87A-201ENST00000307216 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
TMEM87A-201ENST00000307216 NACADO15069 1562 aa24.6■■□□□ 1.53
TMEM87A-201ENST00000307216 ABCC9O60706 1549 aa24.42■■□□□ 1.5
TMEM87A-201ENST00000307216 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
TMEM87A-201ENST00000307216 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
TMEM87A-201ENST00000307216 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
TMEM87A-201ENST00000307216 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
TMEM87A-201ENST00000307216 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
TMEM87A-201ENST00000307216 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
TMEM87A-201ENST00000307216 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
TMEM87A-201ENST00000307216 WIZO95785 1651 aa23.55■■□□□ 1.36
TMEM87A-201ENST00000307216 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
TMEM87A-201ENST00000307216 FOXD1Q16676 465 aa23.44■■□□□ 1.34
TMEM87A-201ENST00000307216 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.34
TMEM87A-201ENST00000307216 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
TMEM87A-201ENST00000307216 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
TMEM87A-201ENST00000307216 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
TMEM87A-201ENST00000307216 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
TMEM87A-201ENST00000307216 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
TMEM87A-201ENST00000307216 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.28
TMEM87A-201ENST00000307216 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMEM87A-201ENST00000307216 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
TMEM87A-201ENST00000307216 ATAD2BQ9ULI0 1458 aa22.9■■□□□ 1.26
TMEM87A-201ENST00000307216 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
TMEM87A-201ENST00000307216 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
TMEM87A-201ENST00000307216 EEA1Q15075 1411 aa22.76■■□□□ 1.23
TMEM87A-201ENST00000307216 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
TMEM87A-201ENST00000307216 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
TMEM87A-201ENST00000307216 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
TMEM87A-201ENST00000307216 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
TMEM87A-201ENST00000307216 NCAPD3P42695 1498 aa22.64■■□□□ 1.21
TMEM87A-201ENST00000307216 HRCP23327 699 aa22.63■■□□□ 1.21
TMEM87A-201ENST00000307216 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
TMEM87A-201ENST00000307216 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
TMEM87A-201ENST00000307216 SOGA1O94964 1423 aa22.44■■□□□ 1.18
TMEM87A-201ENST00000307216 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
TMEM87A-201ENST00000307216 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
TMEM87A-201ENST00000307216 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
TMEM87A-201ENST00000307216 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
TMEM87A-201ENST00000307216 PRDM2Q13029 1718 aa22.39■■□□□ 1.17
TMEM87A-201ENST00000307216 KIF21BO75037 1637 aa22.39■■□□□ 1.17
TMEM87A-201ENST00000307216 GOLGA3Q08378 1498 aa22.39■■□□□ 1.17
TMEM87A-201ENST00000307216 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
TMEM87A-201ENST00000307216 CEP162Q5TB80 1403 aa22.3■■□□□ 1.16
TMEM87A-201ENST00000307216 CFTRP13569 1480 aa22.29■■□□□ 1.16
TMEM87A-201ENST00000307216 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
TMEM87A-201ENST00000307216 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
TMEM87A-201ENST00000307216 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
TMEM87A-201ENST00000307216 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
TMEM87A-201ENST00000307216 MSH5O43196 834 aa22.2■■□□□ 1.14
TMEM87A-201ENST00000307216 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
TMEM87A-201ENST00000307216 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
TMEM87A-201ENST00000307216 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
TMEM87A-201ENST00000307216 CUX1P39880 1505 aa22.12■■□□□ 1.13
TMEM87A-201ENST00000307216 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
TMEM87A-201ENST00000307216 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
TMEM87A-201ENST00000307216 PRXQ9BXM0 1461 aa22■■□□□ 1.11
TMEM87A-201ENST00000307216 CLIP1P30622 1438 aa22■■□□□ 1.11
TMEM87A-201ENST00000307216 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
TMEM87A-201ENST00000307216 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
TMEM87A-201ENST00000307216 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
TMEM87A-201ENST00000307216 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
TMEM87A-201ENST00000307216 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
TMEM87A-201ENST00000307216 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
TMEM87A-201ENST00000307216 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
TMEM87A-201ENST00000307216 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
TMEM87A-201ENST00000307216 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
TMEM87A-201ENST00000307216 CUX2O14529 1486 aa21.76■■□□□ 1.07
TMEM87A-201ENST00000307216 APLP2Q06481 763 aa21.76■■□□□ 1.07
TMEM87A-201ENST00000307216 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
TMEM87A-201ENST00000307216 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
TMEM87A-201ENST00000307216 IGF1RP08069 1367 aa21.67■■□□□ 1.06
TMEM87A-201ENST00000307216 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
TMEM87A-201ENST00000307216 CUL7Q14999 1698 aa21.63■■□□□ 1.05
TMEM87A-201ENST00000307216 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
TMEM87A-201ENST00000307216 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
TMEM87A-201ENST00000307216 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
TMEM87A-201ENST00000307216 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
TMEM87A-201ENST00000307216 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
TMEM87A-201ENST00000307216 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
TMEM87A-201ENST00000307216 NESP48681 1621 aa21.56■■□□□ 1.04
TMEM87A-201ENST00000307216 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
TMEM87A-201ENST00000307216 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
TMEM87A-201ENST00000307216 ADRA2BP18089 450 aa21.53■■□□□ 1.04
TMEM87A-201ENST00000307216 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
TMEM87A-201ENST00000307216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
TMEM87A-201ENST00000307216 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
TMEM87A-201ENST00000307216 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
TMEM87A-201ENST00000307216 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms