RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 NISCHQ9Y2I1 1504 aa29.95■■■□□ 2.38
PRKCSH-212ENST00000591462 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
PRKCSH-212ENST00000591462 ABCC9O60706 1549 aa25.84■■□□□ 1.73
PRKCSH-212ENST00000591462 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
PRKCSH-212ENST00000591462 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
PRKCSH-212ENST00000591462 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
PRKCSH-212ENST00000591462 NACADO15069 1562 aa24.78■■□□□ 1.56
PRKCSH-212ENST00000591462 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
PRKCSH-212ENST00000591462 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
PRKCSH-212ENST00000591462 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.54
PRKCSH-212ENST00000591462 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-212ENST00000591462 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
PRKCSH-212ENST00000591462 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
PRKCSH-212ENST00000591462 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
PRKCSH-212ENST00000591462 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
PRKCSH-212ENST00000591462 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
PRKCSH-212ENST00000591462 HRCP23327 699 aa23.88■■□□□ 1.41
PRKCSH-212ENST00000591462 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
PRKCSH-212ENST00000591462 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
PRKCSH-212ENST00000591462 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
PRKCSH-212ENST00000591462 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
PRKCSH-212ENST00000591462 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
PRKCSH-212ENST00000591462 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
PRKCSH-212ENST00000591462 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
PRKCSH-212ENST00000591462 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
PRKCSH-212ENST00000591462 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
PRKCSH-212ENST00000591462 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
PRKCSH-212ENST00000591462 TRIM26Q12899 539 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-212ENST00000591462 ATAD2BQ9ULI0 1458 aa23.01■■□□□ 1.27
PRKCSH-212ENST00000591462 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
PRKCSH-212ENST00000591462 WIZO95785 1651 aa22.94■■□□□ 1.26
PRKCSH-212ENST00000591462 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
PRKCSH-212ENST00000591462 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
PRKCSH-212ENST00000591462 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
PRKCSH-212ENST00000591462 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
PRKCSH-212ENST00000591462 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
PRKCSH-212ENST00000591462 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
PRKCSH-212ENST00000591462 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
PRKCSH-212ENST00000591462 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
PRKCSH-212ENST00000591462 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
PRKCSH-212ENST00000591462 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
PRKCSH-212ENST00000591462 NESP48681 1621 aa22.46■■□□□ 1.19
PRKCSH-212ENST00000591462 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
PRKCSH-212ENST00000591462 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
PRKCSH-212ENST00000591462 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
PRKCSH-212ENST00000591462 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
PRKCSH-212ENST00000591462 CFTRP13569 1480 aa22.21■■□□□ 1.15
PRKCSH-212ENST00000591462 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
PRKCSH-212ENST00000591462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
PRKCSH-212ENST00000591462 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
PRKCSH-212ENST00000591462 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
PRKCSH-212ENST00000591462 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
PRKCSH-212ENST00000591462 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-212ENST00000591462 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
PRKCSH-212ENST00000591462 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
PRKCSH-212ENST00000591462 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
PRKCSH-212ENST00000591462 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
PRKCSH-212ENST00000591462 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
PRKCSH-212ENST00000591462 THOC2Q8NI27 1593 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-212ENST00000591462 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
PRKCSH-212ENST00000591462 SOGA1O94964 1423 aa21.89■■□□□ 1.1
PRKCSH-212ENST00000591462 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
PRKCSH-212ENST00000591462 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
PRKCSH-212ENST00000591462 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
PRKCSH-212ENST00000591462 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
PRKCSH-212ENST00000591462 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
PRKCSH-212ENST00000591462 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.08
PRKCSH-212ENST00000591462 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
PRKCSH-212ENST00000591462 WDR62O43379 1518 aa21.8■■□□□ 1.08
PRKCSH-212ENST00000591462 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
PRKCSH-212ENST00000591462 CUX2O14529 1486 aa21.75■■□□□ 1.07
PRKCSH-212ENST00000591462 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
PRKCSH-212ENST00000591462 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
PRKCSH-212ENST00000591462 EEA1Q15075 1411 aa21.72■■□□□ 1.07
PRKCSH-212ENST00000591462 CUX1P39880 1505 aa21.7■■□□□ 1.06
PRKCSH-212ENST00000591462 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
PRKCSH-212ENST00000591462 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
PRKCSH-212ENST00000591462 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.06
PRKCSH-212ENST00000591462 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
PRKCSH-212ENST00000591462 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
PRKCSH-212ENST00000591462 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
PRKCSH-212ENST00000591462 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
PRKCSH-212ENST00000591462 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
PRKCSH-212ENST00000591462 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
PRKCSH-212ENST00000591462 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-212ENST00000591462 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
PRKCSH-212ENST00000591462 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-212ENST00000591462 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
PRKCSH-212ENST00000591462 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
PRKCSH-212ENST00000591462 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
PRKCSH-212ENST00000591462 KIF21BO75037 1637 aa21.46■■□□□ 1.03
PRKCSH-212ENST00000591462 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-212ENST00000591462 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-212ENST00000591462 CLIP1P30622 1438 aa21.42■■□□□ 1.02
PRKCSH-212ENST00000591462 AQRO60306 1485 aaKnown RBP eCLIP21.41■■□□□ 1.021e-6■■■□□ 18.9
PRKCSH-212ENST00000591462 VPS8Q8N3P4 1428 aa21.37■■□□□ 1.01
PRKCSH-212ENST00000591462 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
PRKCSH-212ENST00000591462 MIER1Q8N108 512 aa21.34■■□□□ 1.01
PRKCSH-212ENST00000591462 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
PRKCSH-212ENST00000591462 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms