RNA–Protein interactions for RNA: ENST00000328788.5

FRMD3-202, Transcript of FERM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene FRMD3, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-202ENST00000328788 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
FRMD3-202ENST00000328788 CCDC180Q9P1Z9 1646 aa31.9■■■□□ 2.7
FRMD3-202ENST00000328788 ABCC9O60706 1549 aa31.23■■■□□ 2.59
FRMD3-202ENST00000328788 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
FRMD3-202ENST00000328788 NACADO15069 1562 aa30.07■■■□□ 2.4
FRMD3-202ENST00000328788 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
FRMD3-202ENST00000328788 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
FRMD3-202ENST00000328788 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
FRMD3-202ENST00000328788 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
FRMD3-202ENST00000328788 UNC13AQ9UPW8 1703 aa29.32■■■□□ 2.28
FRMD3-202ENST00000328788 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
FRMD3-202ENST00000328788 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
FRMD3-202ENST00000328788 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
FRMD3-202ENST00000328788 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
FRMD3-202ENST00000328788 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
FRMD3-202ENST00000328788 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
FRMD3-202ENST00000328788 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
FRMD3-202ENST00000328788 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
FRMD3-202ENST00000328788 NCAPD3P42695 1498 aa27.77■■■□□ 2.04
FRMD3-202ENST00000328788 SMARCA4P51532 1647 aa27.76■■■□□ 2.03
FRMD3-202ENST00000328788 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
FRMD3-202ENST00000328788 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
FRMD3-202ENST00000328788 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
FRMD3-202ENST00000328788 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
FRMD3-202ENST00000328788 HMGXB3Q12766 1538 aa27.57■■■□□ 2
FRMD3-202ENST00000328788 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
FRMD3-202ENST00000328788 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
FRMD3-202ENST00000328788 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
FRMD3-202ENST00000328788 WIZO95785 1651 aa27.17■■□□□ 1.94
FRMD3-202ENST00000328788 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
FRMD3-202ENST00000328788 NESP48681 1621 aa26.98■■□□□ 1.91
FRMD3-202ENST00000328788 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
FRMD3-202ENST00000328788 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
FRMD3-202ENST00000328788 CADPSQ9ULU8 1353 aa26.93■■□□□ 1.9
FRMD3-202ENST00000328788 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
FRMD3-202ENST00000328788 CUX2O14529 1486 aa26.86■■□□□ 1.89
FRMD3-202ENST00000328788 CFTRP13569 1480 aa26.73■■□□□ 1.87
FRMD3-202ENST00000328788 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
FRMD3-202ENST00000328788 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.86
FRMD3-202ENST00000328788 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
FRMD3-202ENST00000328788 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
FRMD3-202ENST00000328788 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
FRMD3-202ENST00000328788 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
FRMD3-202ENST00000328788 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
FRMD3-202ENST00000328788 WDR62O43379 1518 aa26.46■■□□□ 1.83
FRMD3-202ENST00000328788 PRDM2Q13029 1718 aa26.45■■□□□ 1.83
FRMD3-202ENST00000328788 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
FRMD3-202ENST00000328788 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
FRMD3-202ENST00000328788 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
FRMD3-202ENST00000328788 DNAJC5Q9H3Z4 198 aa26.22■■□□□ 1.79
FRMD3-202ENST00000328788 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
FRMD3-202ENST00000328788 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
FRMD3-202ENST00000328788 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
FRMD3-202ENST00000328788 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
FRMD3-202ENST00000328788 TARBP1Q13395 1621 aaKnown RBP25.83■■□□□ 1.73
FRMD3-202ENST00000328788 CUX1P39880 1505 aa25.82■■□□□ 1.72
FRMD3-202ENST00000328788 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
FRMD3-202ENST00000328788 SOGA1O94964 1423 aa25.8■■□□□ 1.72
FRMD3-202ENST00000328788 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
FRMD3-202ENST00000328788 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
FRMD3-202ENST00000328788 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
FRMD3-202ENST00000328788 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
FRMD3-202ENST00000328788 RAD54L2Q9Y4B4 1467 aa25.71■■□□□ 1.71
FRMD3-202ENST00000328788 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.7
FRMD3-202ENST00000328788 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.7
FRMD3-202ENST00000328788 TDRD9Q8NDG6 1382 aaKnown RBP25.61■■□□□ 1.69
FRMD3-202ENST00000328788 TOP2BQ02880 1626 aa25.6■■□□□ 1.69
FRMD3-202ENST00000328788 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
FRMD3-202ENST00000328788 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
FRMD3-202ENST00000328788 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
FRMD3-202ENST00000328788 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
FRMD3-202ENST00000328788 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
FRMD3-202ENST00000328788 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
FRMD3-202ENST00000328788 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
FRMD3-202ENST00000328788 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
FRMD3-202ENST00000328788 CHD1O14646 1710 aa25.4■■□□□ 1.66
FRMD3-202ENST00000328788 FBLN2P98095 1184 aa25.38■■□□□ 1.65
FRMD3-202ENST00000328788 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
FRMD3-202ENST00000328788 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
FRMD3-202ENST00000328788 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
FRMD3-202ENST00000328788 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
FRMD3-202ENST00000328788 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
FRMD3-202ENST00000328788 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
FRMD3-202ENST00000328788 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
FRMD3-202ENST00000328788 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
FRMD3-202ENST00000328788 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
FRMD3-202ENST00000328788 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
FRMD3-202ENST00000328788 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
FRMD3-202ENST00000328788 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
FRMD3-202ENST00000328788 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
FRMD3-202ENST00000328788 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
FRMD3-202ENST00000328788 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
FRMD3-202ENST00000328788 NUP160Q12769 1436 aa25.1■■□□□ 1.61
FRMD3-202ENST00000328788 IGF1RP08069 1367 aa25.08■■□□□ 1.61
FRMD3-202ENST00000328788 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
FRMD3-202ENST00000328788 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
FRMD3-202ENST00000328788 CUL7Q14999 1698 aa24.98■■□□□ 1.59
FRMD3-202ENST00000328788 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
FRMD3-202ENST00000328788 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
FRMD3-202ENST00000328788 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms