RNA–Protein interactions for RNA: ENST00000427641.2

NCBP2-204, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 2 BASIC

Gene NCBP2, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-204ENST00000427641 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
NCBP2-204ENST00000427641 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
NCBP2-204ENST00000427641 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
NCBP2-204ENST00000427641 DCAF1Q9Y4B6 1507 aa26.25■■□□□ 1.79
NCBP2-204ENST00000427641 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
NCBP2-204ENST00000427641 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
NCBP2-204ENST00000427641 ABCC9O60706 1549 aa25.9■■□□□ 1.74
NCBP2-204ENST00000427641 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
NCBP2-204ENST00000427641 NACADO15069 1562 aa25.69■■□□□ 1.7
NCBP2-204ENST00000427641 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
NCBP2-204ENST00000427641 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
NCBP2-204ENST00000427641 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
NCBP2-204ENST00000427641 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
NCBP2-204ENST00000427641 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
NCBP2-204ENST00000427641 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.53
NCBP2-204ENST00000427641 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
NCBP2-204ENST00000427641 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
NCBP2-204ENST00000427641 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
NCBP2-204ENST00000427641 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
NCBP2-204ENST00000427641 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
NCBP2-204ENST00000427641 WIZO95785 1651 aa24.35■■□□□ 1.49
NCBP2-204ENST00000427641 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
NCBP2-204ENST00000427641 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
NCBP2-204ENST00000427641 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
NCBP2-204ENST00000427641 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
NCBP2-204ENST00000427641 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.41
NCBP2-204ENST00000427641 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
NCBP2-204ENST00000427641 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
NCBP2-204ENST00000427641 BAZ1BQ9UIG0 1483 aaKnown RBP23.82■■□□□ 1.4
NCBP2-204ENST00000427641 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
NCBP2-204ENST00000427641 NCAPD3P42695 1498 aa23.64■■□□□ 1.37
NCBP2-204ENST00000427641 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
NCBP2-204ENST00000427641 HRCP23327 699 aa23.61■■□□□ 1.37
NCBP2-204ENST00000427641 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
NCBP2-204ENST00000427641 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
NCBP2-204ENST00000427641 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
NCBP2-204ENST00000427641 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
NCBP2-204ENST00000427641 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
NCBP2-204ENST00000427641 CFTRP13569 1480 aa23.18■■□□□ 1.3
NCBP2-204ENST00000427641 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
NCBP2-204ENST00000427641 LOC105371045A0A1W2PR82 267 aa23.17■■□□□ 1.3
NCBP2-204ENST00000427641 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
NCBP2-204ENST00000427641 EEA1Q15075 1411 aa23.06■■□□□ 1.28
NCBP2-204ENST00000427641 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
NCBP2-204ENST00000427641 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
NCBP2-204ENST00000427641 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
NCBP2-204ENST00000427641 SOGA1O94964 1423 aa22.96■■□□□ 1.27
NCBP2-204ENST00000427641 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
NCBP2-204ENST00000427641 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
NCBP2-204ENST00000427641 CUX1P39880 1505 aa22.9■■□□□ 1.26
NCBP2-204ENST00000427641 LAMC3Q9Y6N6 1575 aa22.88■■□□□ 1.25
NCBP2-204ENST00000427641 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
NCBP2-204ENST00000427641 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
NCBP2-204ENST00000427641 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
NCBP2-204ENST00000427641 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.24
NCBP2-204ENST00000427641 NESP48681 1621 aa22.77■■□□□ 1.24
NCBP2-204ENST00000427641 KIF21BO75037 1637 aa22.76■■□□□ 1.23
NCBP2-204ENST00000427641 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
NCBP2-204ENST00000427641 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
NCBP2-204ENST00000427641 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
NCBP2-204ENST00000427641 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
NCBP2-204ENST00000427641 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
NCBP2-204ENST00000427641 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
NCBP2-204ENST00000427641 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
NCBP2-204ENST00000427641 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
NCBP2-204ENST00000427641 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
NCBP2-204ENST00000427641 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
NCBP2-204ENST00000427641 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
NCBP2-204ENST00000427641 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
NCBP2-204ENST00000427641 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
NCBP2-204ENST00000427641 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
NCBP2-204ENST00000427641 CUX2O14529 1486 aa22.55■■□□□ 1.2
NCBP2-204ENST00000427641 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
NCBP2-204ENST00000427641 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
NCBP2-204ENST00000427641 PRXQ9BXM0 1461 aa22.5■■□□□ 1.19
NCBP2-204ENST00000427641 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
NCBP2-204ENST00000427641 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
NCBP2-204ENST00000427641 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
NCBP2-204ENST00000427641 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
NCBP2-204ENST00000427641 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
NCBP2-204ENST00000427641 CLIP1P30622 1438 aa22.37■■□□□ 1.17
NCBP2-204ENST00000427641 IGF1RP08069 1367 aa22.36■■□□□ 1.17
NCBP2-204ENST00000427641 CUL7Q14999 1698 aa22.31■■□□□ 1.16
NCBP2-204ENST00000427641 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
NCBP2-204ENST00000427641 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
NCBP2-204ENST00000427641 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
NCBP2-204ENST00000427641 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
NCBP2-204ENST00000427641 WDR62O43379 1518 aa22.24■■□□□ 1.15
NCBP2-204ENST00000427641 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
NCBP2-204ENST00000427641 VPS8Q8N3P4 1428 aa22.19■■□□□ 1.14
NCBP2-204ENST00000427641 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
NCBP2-204ENST00000427641 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
NCBP2-204ENST00000427641 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
NCBP2-204ENST00000427641 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
NCBP2-204ENST00000427641 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
NCBP2-204ENST00000427641 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
NCBP2-204ENST00000427641 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
NCBP2-204ENST00000427641 APLP2Q06481 763 aa22.06■■□□□ 1.12
NCBP2-204ENST00000427641 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
NCBP2-204ENST00000427641 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms