RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 NISCHQ9Y2I1 1504 aa28.24■■■□□ 2.11
SCUBE2-201ENST00000309263 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
SCUBE2-201ENST00000309263 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
SCUBE2-201ENST00000309263 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SCUBE2-201ENST00000309263 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
SCUBE2-201ENST00000309263 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
SCUBE2-201ENST00000309263 HRCP23327 699 aa23.9■■□□□ 1.42
SCUBE2-201ENST00000309263 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
SCUBE2-201ENST00000309263 ABCC9O60706 1549 aa23.76■■□□□ 1.39
SCUBE2-201ENST00000309263 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
SCUBE2-201ENST00000309263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
SCUBE2-201ENST00000309263 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
SCUBE2-201ENST00000309263 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
SCUBE2-201ENST00000309263 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
SCUBE2-201ENST00000309263 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
SCUBE2-201ENST00000309263 NACADO15069 1562 aa23.07■■□□□ 1.28
SCUBE2-201ENST00000309263 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
SCUBE2-201ENST00000309263 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
SCUBE2-201ENST00000309263 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
SCUBE2-201ENST00000309263 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
SCUBE2-201ENST00000309263 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
SCUBE2-201ENST00000309263 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
SCUBE2-201ENST00000309263 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
SCUBE2-201ENST00000309263 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.19
SCUBE2-201ENST00000309263 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
SCUBE2-201ENST00000309263 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
SCUBE2-201ENST00000309263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
SCUBE2-201ENST00000309263 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SCUBE2-201ENST00000309263 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
SCUBE2-201ENST00000309263 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
SCUBE2-201ENST00000309263 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
SCUBE2-201ENST00000309263 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
SCUBE2-201ENST00000309263 GTF3C3Q9Y5Q9 886 aa22.05■■□□□ 1.12
SCUBE2-201ENST00000309263 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
SCUBE2-201ENST00000309263 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
SCUBE2-201ENST00000309263 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
SCUBE2-201ENST00000309263 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
SCUBE2-201ENST00000309263 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
SCUBE2-201ENST00000309263 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
SCUBE2-201ENST00000309263 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
SCUBE2-201ENST00000309263 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
SCUBE2-201ENST00000309263 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SCUBE2-201ENST00000309263 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
SCUBE2-201ENST00000309263 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.06
SCUBE2-201ENST00000309263 WIZO95785 1651 aa21.62■■□□□ 1.05
SCUBE2-201ENST00000309263 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
SCUBE2-201ENST00000309263 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
SCUBE2-201ENST00000309263 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
SCUBE2-201ENST00000309263 MIER1Q8N108 512 aa21.47■■□□□ 1.03
SCUBE2-201ENST00000309263 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
SCUBE2-201ENST00000309263 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
SCUBE2-201ENST00000309263 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
SCUBE2-201ENST00000309263 CEP162Q5TB80 1403 aa21.38■■□□□ 1.01
SCUBE2-201ENST00000309263 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
SCUBE2-201ENST00000309263 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
SCUBE2-201ENST00000309263 MYT1Q01538 1121 aa21.34■■□□□ 1.01
SCUBE2-201ENST00000309263 APLP2Q06481 763 aa21.34■■□□□ 1.01
SCUBE2-201ENST00000309263 NCAPD3P42695 1498 aa21.33■■□□□ 1
SCUBE2-201ENST00000309263 ABCC8Q09428 1581 aa21.32■■□□□ 1
SCUBE2-201ENST00000309263 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
SCUBE2-201ENST00000309263 SOGA1O94964 1423 aa21.3■■□□□ 1
SCUBE2-201ENST00000309263 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
SCUBE2-201ENST00000309263 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
SCUBE2-201ENST00000309263 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
SCUBE2-201ENST00000309263 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
SCUBE2-201ENST00000309263 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
SCUBE2-201ENST00000309263 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.97
SCUBE2-201ENST00000309263 ITGAEP38570 1179 aa21.07■□□□□ 0.96
SCUBE2-201ENST00000309263 BCANQ96GW7 911 aa20.99■□□□□ 0.95
SCUBE2-201ENST00000309263 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
SCUBE2-201ENST00000309263 CLIP1P30622 1438 aa20.92■□□□□ 0.94
SCUBE2-201ENST00000309263 SUPT16HQ9Y5B9 1047 aaKnown RBP20.91■□□□□ 0.94
SCUBE2-201ENST00000309263 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
SCUBE2-201ENST00000309263 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
SCUBE2-201ENST00000309263 EEA1Q15075 1411 aa20.81■□□□□ 0.92
SCUBE2-201ENST00000309263 CFTRP13569 1480 aa20.79■□□□□ 0.92
SCUBE2-201ENST00000309263 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
SCUBE2-201ENST00000309263 NESP48681 1621 aa20.73■□□□□ 0.91
SCUBE2-201ENST00000309263 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
SCUBE2-201ENST00000309263 KANK4Q5T7N3 995 aaPredicted RBP20.71■□□□□ 0.91
SCUBE2-201ENST00000309263 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
SCUBE2-201ENST00000309263 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
SCUBE2-201ENST00000309263 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
SCUBE2-201ENST00000309263 FKBP8Q14318 412 aa20.67■□□□□ 0.9
SCUBE2-201ENST00000309263 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
SCUBE2-201ENST00000309263 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
SCUBE2-201ENST00000309263 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
SCUBE2-201ENST00000309263 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
SCUBE2-201ENST00000309263 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
SCUBE2-201ENST00000309263 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
SCUBE2-201ENST00000309263 TRIM52Q96A61 297 aa20.58■□□□□ 0.88
SCUBE2-201ENST00000309263 NEFLP07196 543 aa20.57■□□□□ 0.88
SCUBE2-201ENST00000309263 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
SCUBE2-201ENST00000309263 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
SCUBE2-201ENST00000309263 FAM50AQ14320 339 aaKnown RBP20.52■□□□□ 0.88
SCUBE2-201ENST00000309263 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.88
SCUBE2-201ENST00000309263 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
SCUBE2-201ENST00000309263 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
SCUBE2-201ENST00000309263 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
SCUBE2-201ENST00000309263 KIF21BO75037 1637 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms