RNA–Protein interactions for RNA: ENST00000589300.1

LINC00479-204, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best) BASIC

Gene LINC00479, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-204ENST00000589300 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
LINC00479-204ENST00000589300 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
LINC00479-204ENST00000589300 ABCC9O60706 1549 aa32.66■■■□□ 2.82
LINC00479-204ENST00000589300 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
LINC00479-204ENST00000589300 NACADO15069 1562 aa31.06■■■□□ 2.56
LINC00479-204ENST00000589300 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
LINC00479-204ENST00000589300 MYO15BQ96JP2 1530 aa30.72■■■□□ 2.51
LINC00479-204ENST00000589300 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
LINC00479-204ENST00000589300 ZCCHC6Q5VYS8 1495 aaKnown RBP30.53■■■□□ 2.48
LINC00479-204ENST00000589300 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
LINC00479-204ENST00000589300 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
LINC00479-204ENST00000589300 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
LINC00479-204ENST00000589300 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.45
LINC00479-204ENST00000589300 SCRIBQ14160 1630 aa29.99■■■□□ 2.39
LINC00479-204ENST00000589300 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
LINC00479-204ENST00000589300 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
LINC00479-204ENST00000589300 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
LINC00479-204ENST00000589300 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
LINC00479-204ENST00000589300 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
LINC00479-204ENST00000589300 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
LINC00479-204ENST00000589300 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
LINC00479-204ENST00000589300 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
LINC00479-204ENST00000589300 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
LINC00479-204ENST00000589300 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
LINC00479-204ENST00000589300 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
LINC00479-204ENST00000589300 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
LINC00479-204ENST00000589300 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
LINC00479-204ENST00000589300 ERCC6Q03468 1493 aa28.16■■■□□ 2.1
LINC00479-204ENST00000589300 NESP48681 1621 aa28.13■■■□□ 2.09
LINC00479-204ENST00000589300 CUX2O14529 1486 aa28.08■■■□□ 2.09
LINC00479-204ENST00000589300 WIZO95785 1651 aa28.02■■■□□ 2.08
LINC00479-204ENST00000589300 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
LINC00479-204ENST00000589300 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
LINC00479-204ENST00000589300 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
LINC00479-204ENST00000589300 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
LINC00479-204ENST00000589300 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
LINC00479-204ENST00000589300 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
LINC00479-204ENST00000589300 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
LINC00479-204ENST00000589300 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
LINC00479-204ENST00000589300 MRC2Q9UBG0 1479 aa27.55■■■□□ 2
LINC00479-204ENST00000589300 CFTRP13569 1480 aa27.52■■■□□ 2
LINC00479-204ENST00000589300 WDR62O43379 1518 aa27.51■■□□□ 1.99
LINC00479-204ENST00000589300 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
LINC00479-204ENST00000589300 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
LINC00479-204ENST00000589300 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
LINC00479-204ENST00000589300 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
LINC00479-204ENST00000589300 URB2Q14146 1524 aaKnown RBP27.25■■□□□ 1.95
LINC00479-204ENST00000589300 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
LINC00479-204ENST00000589300 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
LINC00479-204ENST00000589300 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
LINC00479-204ENST00000589300 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
LINC00479-204ENST00000589300 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
LINC00479-204ENST00000589300 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
LINC00479-204ENST00000589300 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
LINC00479-204ENST00000589300 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
LINC00479-204ENST00000589300 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
LINC00479-204ENST00000589300 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
LINC00479-204ENST00000589300 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.85
LINC00479-204ENST00000589300 CUX1P39880 1505 aa26.61■■□□□ 1.85
LINC00479-204ENST00000589300 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
LINC00479-204ENST00000589300 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
LINC00479-204ENST00000589300 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
LINC00479-204ENST00000589300 SOGA1O94964 1423 aa26.57■■□□□ 1.84
LINC00479-204ENST00000589300 CHD1O14646 1710 aa26.54■■□□□ 1.84
LINC00479-204ENST00000589300 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
LINC00479-204ENST00000589300 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
LINC00479-204ENST00000589300 RIMBP3CA6NJZ7 1639 aa26.48■■□□□ 1.83
LINC00479-204ENST00000589300 RIMBP3BA6NNM3 1639 aa26.48■■□□□ 1.83
LINC00479-204ENST00000589300 RIMBP3Q9UFD9 1639 aa26.48■■□□□ 1.83
LINC00479-204ENST00000589300 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
LINC00479-204ENST00000589300 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
LINC00479-204ENST00000589300 FBLN2P98095 1184 aa26.35■■□□□ 1.81
LINC00479-204ENST00000589300 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
LINC00479-204ENST00000589300 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
LINC00479-204ENST00000589300 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
LINC00479-204ENST00000589300 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
LINC00479-204ENST00000589300 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
LINC00479-204ENST00000589300 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
LINC00479-204ENST00000589300 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
LINC00479-204ENST00000589300 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
LINC00479-204ENST00000589300 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
LINC00479-204ENST00000589300 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
LINC00479-204ENST00000589300 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
LINC00479-204ENST00000589300 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
LINC00479-204ENST00000589300 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
LINC00479-204ENST00000589300 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
LINC00479-204ENST00000589300 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
LINC00479-204ENST00000589300 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
LINC00479-204ENST00000589300 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
LINC00479-204ENST00000589300 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
LINC00479-204ENST00000589300 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
LINC00479-204ENST00000589300 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
LINC00479-204ENST00000589300 NUP160Q12769 1436 aa25.92■■□□□ 1.74
LINC00479-204ENST00000589300 SHROOM2Q13796 1616 aa25.82■■□□□ 1.72
LINC00479-204ENST00000589300 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
LINC00479-204ENST00000589300 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
LINC00479-204ENST00000589300 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
LINC00479-204ENST00000589300 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
LINC00479-204ENST00000589300 CUL7Q14999 1698 aa25.67■■□□□ 1.7
LINC00479-204ENST00000589300 IGF1RP08069 1367 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms