RNA–Protein interactions for RNA: ENST00000368399.1

DPM3-202, Transcript of dolichyl-phosphate mannosyltransferase subunit 3, humanhuman

BASIC

Gene DPM3, Length 517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPM3-202ENST00000368399 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
DPM3-202ENST00000368399 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
DPM3-202ENST00000368399 ABCC9O60706 1549 aa31.43■■■□□ 2.62
DPM3-202ENST00000368399 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
DPM3-202ENST00000368399 NACADO15069 1562 aa30.08■■■□□ 2.41
DPM3-202ENST00000368399 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
DPM3-202ENST00000368399 MYO15BQ96JP2 1530 aa29.88■■■□□ 2.37
DPM3-202ENST00000368399 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
DPM3-202ENST00000368399 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
DPM3-202ENST00000368399 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
DPM3-202ENST00000368399 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
DPM3-202ENST00000368399 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
DPM3-202ENST00000368399 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.26
DPM3-202ENST00000368399 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
DPM3-202ENST00000368399 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
DPM3-202ENST00000368399 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
DPM3-202ENST00000368399 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
DPM3-202ENST00000368399 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
DPM3-202ENST00000368399 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
DPM3-202ENST00000368399 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
DPM3-202ENST00000368399 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
DPM3-202ENST00000368399 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
DPM3-202ENST00000368399 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
DPM3-202ENST00000368399 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
DPM3-202ENST00000368399 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
DPM3-202ENST00000368399 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
DPM3-202ENST00000368399 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
DPM3-202ENST00000368399 WIZO95785 1651 aa27.29■■□□□ 1.96
DPM3-202ENST00000368399 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
DPM3-202ENST00000368399 NESP48681 1621 aa27.16■■□□□ 1.94
DPM3-202ENST00000368399 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
DPM3-202ENST00000368399 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
DPM3-202ENST00000368399 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
DPM3-202ENST00000368399 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
DPM3-202ENST00000368399 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
DPM3-202ENST00000368399 CUX2O14529 1486 aa26.89■■□□□ 1.9
DPM3-202ENST00000368399 CFTRP13569 1480 aa26.78■■□□□ 1.88
DPM3-202ENST00000368399 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
DPM3-202ENST00000368399 THOC2Q8NI27 1593 aaKnown RBP26.74■■□□□ 1.87
DPM3-202ENST00000368399 CCDC88BA6NC98 1476 aa26.73■■□□□ 1.87
DPM3-202ENST00000368399 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
DPM3-202ENST00000368399 MRC2Q9UBG0 1479 aa26.61■■□□□ 1.85
DPM3-202ENST00000368399 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
DPM3-202ENST00000368399 WDR62O43379 1518 aa26.52■■□□□ 1.84
DPM3-202ENST00000368399 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
DPM3-202ENST00000368399 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
DPM3-202ENST00000368399 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
DPM3-202ENST00000368399 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
DPM3-202ENST00000368399 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
DPM3-202ENST00000368399 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
DPM3-202ENST00000368399 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
DPM3-202ENST00000368399 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
DPM3-202ENST00000368399 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
DPM3-202ENST00000368399 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
DPM3-202ENST00000368399 CUX1P39880 1505 aa25.92■■□□□ 1.74
DPM3-202ENST00000368399 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
DPM3-202ENST00000368399 SOGA1O94964 1423 aa25.88■■□□□ 1.73
DPM3-202ENST00000368399 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
DPM3-202ENST00000368399 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
DPM3-202ENST00000368399 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.73
DPM3-202ENST00000368399 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
DPM3-202ENST00000368399 EIF4G3O43432 1585 aaKnown RBP25.8■■□□□ 1.72
DPM3-202ENST00000368399 TDRD9Q8NDG6 1382 aaKnown RBP25.75■■□□□ 1.71
DPM3-202ENST00000368399 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
DPM3-202ENST00000368399 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
DPM3-202ENST00000368399 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
DPM3-202ENST00000368399 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
DPM3-202ENST00000368399 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
DPM3-202ENST00000368399 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
DPM3-202ENST00000368399 GRIN2BQ13224 1484 aa25.57■■□□□ 1.68
DPM3-202ENST00000368399 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
DPM3-202ENST00000368399 FBLN2P98095 1184 aa25.53■■□□□ 1.68
DPM3-202ENST00000368399 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
DPM3-202ENST00000368399 MAGI1Q96QZ7 1491 aaPredicted RBP25.51■■□□□ 1.67
DPM3-202ENST00000368399 CHD1O14646 1710 aa25.49■■□□□ 1.67
DPM3-202ENST00000368399 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
DPM3-202ENST00000368399 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
DPM3-202ENST00000368399 SYNJ2O15056 1496 aa25.42■■□□□ 1.66
DPM3-202ENST00000368399 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
DPM3-202ENST00000368399 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
DPM3-202ENST00000368399 RIMBP3CA6NJZ7 1639 aa25.32■■□□□ 1.64
DPM3-202ENST00000368399 RIMBP3BA6NNM3 1639 aa25.32■■□□□ 1.64
DPM3-202ENST00000368399 RIMBP3Q9UFD9 1639 aa25.32■■□□□ 1.64
DPM3-202ENST00000368399 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
DPM3-202ENST00000368399 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
DPM3-202ENST00000368399 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
DPM3-202ENST00000368399 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
DPM3-202ENST00000368399 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
DPM3-202ENST00000368399 GRIN2AQ12879 1464 aa25.22■■□□□ 1.63
DPM3-202ENST00000368399 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
DPM3-202ENST00000368399 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
DPM3-202ENST00000368399 IGF1RP08069 1367 aa25.16■■□□□ 1.62
DPM3-202ENST00000368399 NUP160Q12769 1436 aa25.15■■□□□ 1.62
DPM3-202ENST00000368399 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
DPM3-202ENST00000368399 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
DPM3-202ENST00000368399 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
DPM3-202ENST00000368399 CUL7Q14999 1698 aa24.97■■□□□ 1.59
DPM3-202ENST00000368399 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
DPM3-202ENST00000368399 JPH4Q96JJ6 628 aa24.94■■□□□ 1.58
DPM3-202ENST00000368399 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms