RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.26
ATRIP-204ENST00000412052 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
ATRIP-204ENST00000412052 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.56
ATRIP-204ENST00000412052 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
ATRIP-204ENST00000412052 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
ATRIP-204ENST00000412052 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
ATRIP-204ENST00000412052 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
ATRIP-204ENST00000412052 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
ATRIP-204ENST00000412052 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
ATRIP-204ENST00000412052 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
ATRIP-204ENST00000412052 HRCP23327 699 aa23.56■■□□□ 1.36
ATRIP-204ENST00000412052 LOC105371045A0A1W2PR82 267 aa23.53■■□□□ 1.36
ATRIP-204ENST00000412052 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
ATRIP-204ENST00000412052 ABCC9O60706 1549 aa23.31■■□□□ 1.32
ATRIP-204ENST00000412052 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
ATRIP-204ENST00000412052 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
ATRIP-204ENST00000412052 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
ATRIP-204ENST00000412052 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
ATRIP-204ENST00000412052 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
ATRIP-204ENST00000412052 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
ATRIP-204ENST00000412052 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
ATRIP-204ENST00000412052 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.26
ATRIP-204ENST00000412052 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
ATRIP-204ENST00000412052 NACADO15069 1562 aa22.69■■□□□ 1.22
ATRIP-204ENST00000412052 WIZO95785 1651 aa22.67■■□□□ 1.22
ATRIP-204ENST00000412052 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
ATRIP-204ENST00000412052 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
ATRIP-204ENST00000412052 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.16
ATRIP-204ENST00000412052 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
ATRIP-204ENST00000412052 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
ATRIP-204ENST00000412052 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
ATRIP-204ENST00000412052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
ATRIP-204ENST00000412052 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
ATRIP-204ENST00000412052 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
ATRIP-204ENST00000412052 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.13
ATRIP-204ENST00000412052 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
ATRIP-204ENST00000412052 SOGA1O94964 1423 aa22.09■■□□□ 1.13
ATRIP-204ENST00000412052 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.12
ATRIP-204ENST00000412052 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
ATRIP-204ENST00000412052 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
ATRIP-204ENST00000412052 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
ATRIP-204ENST00000412052 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
ATRIP-204ENST00000412052 UBTFP17480 764 aaKnown RBP21.89■■□□□ 1.1
ATRIP-204ENST00000412052 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
ATRIP-204ENST00000412052 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
ATRIP-204ENST00000412052 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
ATRIP-204ENST00000412052 TNIKQ9UKE5 1360 aa21.84■■□□□ 1.09
ATRIP-204ENST00000412052 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
ATRIP-204ENST00000412052 EEA1Q15075 1411 aa21.71■■□□□ 1.07
ATRIP-204ENST00000412052 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
ATRIP-204ENST00000412052 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
ATRIP-204ENST00000412052 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
ATRIP-204ENST00000412052 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
ATRIP-204ENST00000412052 PEG3Q9GZU2 1588 aa21.62■■□□□ 1.05
ATRIP-204ENST00000412052 HNRNPUL2Q1KMD3 747 aaKnown RBP21.59■■□□□ 1.05
ATRIP-204ENST00000412052 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
ATRIP-204ENST00000412052 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
ATRIP-204ENST00000412052 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
ATRIP-204ENST00000412052 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
ATRIP-204ENST00000412052 CLIP1P30622 1438 aa21.53■■□□□ 1.04
ATRIP-204ENST00000412052 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
ATRIP-204ENST00000412052 KIF21BO75037 1637 aa21.49■■□□□ 1.03
ATRIP-204ENST00000412052 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
ATRIP-204ENST00000412052 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
ATRIP-204ENST00000412052 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
ATRIP-204ENST00000412052 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1
ATRIP-204ENST00000412052 APLP2Q06481 763 aa21.32■■□□□ 1
ATRIP-204ENST00000412052 TOP2BQ02880 1626 aa21.31■■□□□ 1
ATRIP-204ENST00000412052 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
ATRIP-204ENST00000412052 MIER1Q8N108 512 aa21.24■□□□□ 0.99
ATRIP-204ENST00000412052 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
ATRIP-204ENST00000412052 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
ATRIP-204ENST00000412052 BIVM-ERCC5R4GMW8 1640 aa21.2■□□□□ 0.98
ATRIP-204ENST00000412052 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
ATRIP-204ENST00000412052 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
ATRIP-204ENST00000412052 CUX1P39880 1505 aa21.16■□□□□ 0.98
ATRIP-204ENST00000412052 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
ATRIP-204ENST00000412052 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
ATRIP-204ENST00000412052 DHX57Q6P158 1386 aaKnown RBP21.05■□□□□ 0.96
ATRIP-204ENST00000412052 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
ATRIP-204ENST00000412052 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
ATRIP-204ENST00000412052 ITGAEP38570 1179 aa21.01■□□□□ 0.95
ATRIP-204ENST00000412052 CFTRP13569 1480 aa20.97■□□□□ 0.95
ATRIP-204ENST00000412052 ARHGAP35Q9NRY4 1499 aa20.97■□□□□ 0.95
ATRIP-204ENST00000412052 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
ATRIP-204ENST00000412052 CUX2O14529 1486 aa20.89■□□□□ 0.93
ATRIP-204ENST00000412052 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
ATRIP-204ENST00000412052 IGF1RP08069 1367 aa20.85■□□□□ 0.93
ATRIP-204ENST00000412052 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.92
ATRIP-204ENST00000412052 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
ATRIP-204ENST00000412052 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
ATRIP-204ENST00000412052 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
ATRIP-204ENST00000412052 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
ATRIP-204ENST00000412052 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
ATRIP-204ENST00000412052 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
ATRIP-204ENST00000412052 TIAM1Q13009 1591 aa20.71■□□□□ 0.91
ATRIP-204ENST00000412052 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
ATRIP-204ENST00000412052 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
ATRIP-204ENST00000412052 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
ATRIP-204ENST00000412052 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms