Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 AC090505.1-201ENST00000430515 1834 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 TOMM22P5-201ENST00000416399 439 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 AL512638.1-201ENST00000457493 794 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 SERBP1P3-201ENST00000459980 809 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 INGX-202ENST00000489074 768 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 IGHV3-42-201ENST00000520410 361 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 DUX4L27-201ENST00000554796 1261 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 AC007967.4-201ENST00000614700 386 ntBASIC14.14□□□□□ -0.15
CHRNB3Q05901 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRNB3Q05901 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHRNB3Q05901 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AL157414.3-201ENST00000624276 1954 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC055876.3-201ENST00000431496 288 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 RPL13P2-201ENST00000440687 659 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 SPDYE14P-201ENST00000442619 822 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC069120.2-201ENST00000524091 540 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms