RNA–Protein interactions for RNA: ENST00000381007.8

SGTB-201, Transcript of small glutamine rich tetratricopeptide repeat containing beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGTB, Length 5,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGTB-201ENST00000381007 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
SGTB-201ENST00000381007 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
SGTB-201ENST00000381007 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
SGTB-201ENST00000381007 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
SGTB-201ENST00000381007 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
SGTB-201ENST00000381007 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
SGTB-201ENST00000381007 APLP2Q06481 763 aa21.72■■□□□ 1.07
SGTB-201ENST00000381007 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
SGTB-201ENST00000381007 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
SGTB-201ENST00000381007 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
SGTB-201ENST00000381007 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
SGTB-201ENST00000381007 TRIM41Q8WV44 630 aa21.27■■□□□ 1
SGTB-201ENST00000381007 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
SGTB-201ENST00000381007 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
SGTB-201ENST00000381007 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
SGTB-201ENST00000381007 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
SGTB-201ENST00000381007 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
SGTB-201ENST00000381007 PPARGC1BQ86YN6 1023 aaKnown RBP20.81■□□□□ 0.92
SGTB-201ENST00000381007 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
SGTB-201ENST00000381007 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
SGTB-201ENST00000381007 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
SGTB-201ENST00000381007 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
SGTB-201ENST00000381007 ITGAEP38570 1179 aa20.43■□□□□ 0.86
SGTB-201ENST00000381007 NEFLP07196 543 aa20.43■□□□□ 0.86
SGTB-201ENST00000381007 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
SGTB-201ENST00000381007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
SGTB-201ENST00000381007 HNRNPUL2Q1KMD3 747 aaKnown RBP20.32■□□□□ 0.84
SGTB-201ENST00000381007 HRCP23327 699 aa20.26■□□□□ 0.83
SGTB-201ENST00000381007 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
SGTB-201ENST00000381007 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
SGTB-201ENST00000381007 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
SGTB-201ENST00000381007 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
SGTB-201ENST00000381007 ABCC9O60706 1549 aa19.88■□□□□ 0.77
SGTB-201ENST00000381007 FAM50AQ14320 339 aaKnown RBP19.83■□□□□ 0.77
SGTB-201ENST00000381007 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
SGTB-201ENST00000381007 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.76
SGTB-201ENST00000381007 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
SGTB-201ENST00000381007 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
SGTB-201ENST00000381007 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
SGTB-201ENST00000381007 MYT1Q01538 1121 aa19.65■□□□□ 0.74
SGTB-201ENST00000381007 FBLN2P98095 1184 aa19.55■□□□□ 0.72
SGTB-201ENST00000381007 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
SGTB-201ENST00000381007 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
SGTB-201ENST00000381007 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
SGTB-201ENST00000381007 ARID3CA6NKF2 412 aa19.43■□□□□ 0.7
SGTB-201ENST00000381007 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
SGTB-201ENST00000381007 BCANQ96GW7 911 aa19.41■□□□□ 0.7
SGTB-201ENST00000381007 ANP32CO43423 234 aa19.37■□□□□ 0.69
SGTB-201ENST00000381007 GTF3C3Q9Y5Q9 886 aa19.34■□□□□ 0.69
SGTB-201ENST00000381007 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
SGTB-201ENST00000381007 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
SGTB-201ENST00000381007 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
SGTB-201ENST00000381007 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
SGTB-201ENST00000381007 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
SGTB-201ENST00000381007 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
SGTB-201ENST00000381007 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
SGTB-201ENST00000381007 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
SGTB-201ENST00000381007 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
SGTB-201ENST00000381007 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
SGTB-201ENST00000381007 NEFMP07197 916 aa18.98■□□□□ 0.63
SGTB-201ENST00000381007 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
SGTB-201ENST00000381007 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
SGTB-201ENST00000381007 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
SGTB-201ENST00000381007 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
SGTB-201ENST00000381007 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
SGTB-201ENST00000381007 HNRNPUQ00839 825 aaKnown RBP eCLIP18.85■□□□□ 0.61
SGTB-201ENST00000381007 ESF1Q9H501 851 aaKnown RBP18.85■□□□□ 0.61
SGTB-201ENST00000381007 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.6
SGTB-201ENST00000381007 FKBP8Q14318 412 aa18.83■□□□□ 0.6
SGTB-201ENST00000381007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
SGTB-201ENST00000381007 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
SGTB-201ENST00000381007 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
SGTB-201ENST00000381007 NPM2Q86SE8 214 aaKnown RBP18.8■□□□□ 0.6
SGTB-201ENST00000381007 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
SGTB-201ENST00000381007 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
SGTB-201ENST00000381007 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
SGTB-201ENST00000381007 ANP32AP39687 249 aaKnown RBP18.77■□□□□ 0.6
SGTB-201ENST00000381007 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
SGTB-201ENST00000381007 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
SGTB-201ENST00000381007 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
SGTB-201ENST00000381007 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
SGTB-201ENST00000381007 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
SGTB-201ENST00000381007 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
SGTB-201ENST00000381007 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
SGTB-201ENST00000381007 CLIP1P30622 1438 aa18.65■□□□□ 0.58
SGTB-201ENST00000381007 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
SGTB-201ENST00000381007 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
SGTB-201ENST00000381007 MIER1Q8N108 512 aa18.61■□□□□ 0.57
SGTB-201ENST00000381007 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
SGTB-201ENST00000381007 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
SGTB-201ENST00000381007 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
SGTB-201ENST00000381007 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
SGTB-201ENST00000381007 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
SGTB-201ENST00000381007 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
SGTB-201ENST00000381007 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
SGTB-201ENST00000381007 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
SGTB-201ENST00000381007 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
SGTB-201ENST00000381007 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
SGTB-201ENST00000381007 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
SGTB-201ENST00000381007 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms