RNA–Protein interactions for RNA: ENST00000610140.5

NT5C3A-213, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NT5C3A, Length 1,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-213ENST00000610140 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
NT5C3A-213ENST00000610140 AEBP2Q6ZN18 517 aaPredicted RBP29.97■■■□□ 2.39
NT5C3A-213ENST00000610140 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
NT5C3A-213ENST00000610140 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
NT5C3A-213ENST00000610140 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
NT5C3A-213ENST00000610140 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
NT5C3A-213ENST00000610140 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
NT5C3A-213ENST00000610140 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
NT5C3A-213ENST00000610140 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.65
NT5C3A-213ENST00000610140 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
NT5C3A-213ENST00000610140 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
NT5C3A-213ENST00000610140 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
NT5C3A-213ENST00000610140 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
NT5C3A-213ENST00000610140 ABCC9O60706 1549 aa24.76■■□□□ 1.55
NT5C3A-213ENST00000610140 NACADO15069 1562 aa24.75■■□□□ 1.55
NT5C3A-213ENST00000610140 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
NT5C3A-213ENST00000610140 POTEDQ86YR6 584 aa24.39■■□□□ 1.49
NT5C3A-213ENST00000610140 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
NT5C3A-213ENST00000610140 FOXD1Q16676 465 aa24.17■■□□□ 1.46
NT5C3A-213ENST00000610140 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
NT5C3A-213ENST00000610140 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
NT5C3A-213ENST00000610140 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
NT5C3A-213ENST00000610140 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
NT5C3A-213ENST00000610140 WIZO95785 1651 aa23.94■■□□□ 1.42
NT5C3A-213ENST00000610140 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
NT5C3A-213ENST00000610140 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
NT5C3A-213ENST00000610140 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
NT5C3A-213ENST00000610140 BICRAQ9NZM4 1560 aa23.64■■□□□ 1.38
NT5C3A-213ENST00000610140 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
NT5C3A-213ENST00000610140 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
NT5C3A-213ENST00000610140 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
NT5C3A-213ENST00000610140 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
NT5C3A-213ENST00000610140 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
NT5C3A-213ENST00000610140 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
NT5C3A-213ENST00000610140 PCGF6Q9BYE7 350 aa23.31■■□□□ 1.32
NT5C3A-213ENST00000610140 HRCP23327 699 aa23.25■■□□□ 1.31
NT5C3A-213ENST00000610140 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
NT5C3A-213ENST00000610140 ABCC8Q09428 1581 aa23.19■■□□□ 1.3
NT5C3A-213ENST00000610140 MSH5O43196 834 aa23.19■■□□□ 1.3
NT5C3A-213ENST00000610140 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
NT5C3A-213ENST00000610140 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
NT5C3A-213ENST00000610140 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.29
NT5C3A-213ENST00000610140 EEA1Q15075 1411 aa22.99■■□□□ 1.27
NT5C3A-213ENST00000610140 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
NT5C3A-213ENST00000610140 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
NT5C3A-213ENST00000610140 HMGXB3Q12766 1538 aa22.89■■□□□ 1.25
NT5C3A-213ENST00000610140 SOGA1O94964 1423 aa22.87■■□□□ 1.25
NT5C3A-213ENST00000610140 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
NT5C3A-213ENST00000610140 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
NT5C3A-213ENST00000610140 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
NT5C3A-213ENST00000610140 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
NT5C3A-213ENST00000610140 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
NT5C3A-213ENST00000610140 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
NT5C3A-213ENST00000610140 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
NT5C3A-213ENST00000610140 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
NT5C3A-213ENST00000610140 KIF21BO75037 1637 aa22.7■■□□□ 1.22
NT5C3A-213ENST00000610140 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
NT5C3A-213ENST00000610140 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
NT5C3A-213ENST00000610140 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
NT5C3A-213ENST00000610140 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
NT5C3A-213ENST00000610140 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
NT5C3A-213ENST00000610140 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
NT5C3A-213ENST00000610140 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
NT5C3A-213ENST00000610140 CFTRP13569 1480 aa22.52■■□□□ 1.2
NT5C3A-213ENST00000610140 CUX1P39880 1505 aa22.44■■□□□ 1.18
NT5C3A-213ENST00000610140 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
NT5C3A-213ENST00000610140 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
NT5C3A-213ENST00000610140 PIAS4Q8N2W9 510 aaPredicted RBP22.37■■□□□ 1.17
NT5C3A-213ENST00000610140 CLIP1P30622 1438 aa22.37■■□□□ 1.17
NT5C3A-213ENST00000610140 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
NT5C3A-213ENST00000610140 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
NT5C3A-213ENST00000610140 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
NT5C3A-213ENST00000610140 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
NT5C3A-213ENST00000610140 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
NT5C3A-213ENST00000610140 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.13
NT5C3A-213ENST00000610140 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
NT5C3A-213ENST00000610140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
NT5C3A-213ENST00000610140 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.12
NT5C3A-213ENST00000610140 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
NT5C3A-213ENST00000610140 CUX2O14529 1486 aa22.06■■□□□ 1.12
NT5C3A-213ENST00000610140 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
NT5C3A-213ENST00000610140 APLP2Q06481 763 aa22.06■■□□□ 1.12
NT5C3A-213ENST00000610140 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
NT5C3A-213ENST00000610140 IGF1RP08069 1367 aa21.97■■□□□ 1.11
NT5C3A-213ENST00000610140 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
NT5C3A-213ENST00000610140 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
NT5C3A-213ENST00000610140 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
NT5C3A-213ENST00000610140 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
NT5C3A-213ENST00000610140 CARMIL1Q5VZK9 1371 aa21.9■■□□□ 1.1
NT5C3A-213ENST00000610140 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.1
NT5C3A-213ENST00000610140 NESP48681 1621 aa21.88■■□□□ 1.09
NT5C3A-213ENST00000610140 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
NT5C3A-213ENST00000610140 CUL7Q14999 1698 aa21.84■■□□□ 1.09
NT5C3A-213ENST00000610140 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
NT5C3A-213ENST00000610140 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
NT5C3A-213ENST00000610140 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
NT5C3A-213ENST00000610140 MAP3K1Q13233 1512 aa21.78■■□□□ 1.08
NT5C3A-213ENST00000610140 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
NT5C3A-213ENST00000610140 CTTNBP2Q8WZ74 1663 aa21.75■■□□□ 1.07
NT5C3A-213ENST00000610140 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms