RNA–Protein interactions for RNA: ENST00000414202.6

RIC1-203, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIC1, Length 6,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-203ENST00000414202 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
RIC1-203ENST00000414202 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
RIC1-203ENST00000414202 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
RIC1-203ENST00000414202 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
RIC1-203ENST00000414202 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
RIC1-203ENST00000414202 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
RIC1-203ENST00000414202 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
RIC1-203ENST00000414202 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
RIC1-203ENST00000414202 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
RIC1-203ENST00000414202 APLP2Q06481 763 aa21.4■■□□□ 1.02
RIC1-203ENST00000414202 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
RIC1-203ENST00000414202 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
RIC1-203ENST00000414202 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
RIC1-203ENST00000414202 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
RIC1-203ENST00000414202 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
RIC1-203ENST00000414202 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
RIC1-203ENST00000414202 CENPBP07199 599 aaPredicted RBP21.09■□□□□ 0.97
RIC1-203ENST00000414202 MYT1Q01538 1121 aa21■□□□□ 0.95
RIC1-203ENST00000414202 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
RIC1-203ENST00000414202 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
RIC1-203ENST00000414202 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
RIC1-203ENST00000414202 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
RIC1-203ENST00000414202 NEFLP07196 543 aa20.66■□□□□ 0.9
RIC1-203ENST00000414202 ITGAEP38570 1179 aa20.55■□□□□ 0.88
RIC1-203ENST00000414202 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
RIC1-203ENST00000414202 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
RIC1-203ENST00000414202 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
RIC1-203ENST00000414202 HRCP23327 699 aa20.45■□□□□ 0.86
RIC1-203ENST00000414202 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
RIC1-203ENST00000414202 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
RIC1-203ENST00000414202 MYT1LQ9UL68 1186 aa20.27■□□□□ 0.84
RIC1-203ENST00000414202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
RIC1-203ENST00000414202 DAXXQ9UER7 740 aaPredicted RBP20.16■□□□□ 0.82
RIC1-203ENST00000414202 BCANQ96GW7 911 aa20.15■□□□□ 0.82
RIC1-203ENST00000414202 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
RIC1-203ENST00000414202 DIEXFQ68CQ4 756 aaKnown RBP19.98■□□□□ 0.79
RIC1-203ENST00000414202 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
RIC1-203ENST00000414202 GTF3C3Q9Y5Q9 886 aa19.91■□□□□ 0.78
RIC1-203ENST00000414202 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
RIC1-203ENST00000414202 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
RIC1-203ENST00000414202 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
RIC1-203ENST00000414202 RTL5Q5HYW3 569 aaPredicted RBP19.77■□□□□ 0.76
RIC1-203ENST00000414202 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
RIC1-203ENST00000414202 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
RIC1-203ENST00000414202 SLC24A1O60721 1099 aa19.58■□□□□ 0.73
RIC1-203ENST00000414202 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
RIC1-203ENST00000414202 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
RIC1-203ENST00000414202 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
RIC1-203ENST00000414202 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
RIC1-203ENST00000414202 ANP32CO43423 234 aa19.33■□□□□ 0.69
RIC1-203ENST00000414202 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
RIC1-203ENST00000414202 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
RIC1-203ENST00000414202 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
RIC1-203ENST00000414202 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
RIC1-203ENST00000414202 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
RIC1-203ENST00000414202 FKBP8Q14318 412 aa19.21■□□□□ 0.67
RIC1-203ENST00000414202 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
RIC1-203ENST00000414202 ARXQ96QS3 562 aa19.19■□□□□ 0.66
RIC1-203ENST00000414202 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
RIC1-203ENST00000414202 NBR1Q14596 966 aa19.17■□□□□ 0.66
RIC1-203ENST00000414202 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
RIC1-203ENST00000414202 FBLN2P98095 1184 aa19.08■□□□□ 0.64
RIC1-203ENST00000414202 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
RIC1-203ENST00000414202 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
RIC1-203ENST00000414202 ANP32AP39687 249 aaKnown RBP19.05■□□□□ 0.64
RIC1-203ENST00000414202 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
RIC1-203ENST00000414202 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
RIC1-203ENST00000414202 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
RIC1-203ENST00000414202 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
RIC1-203ENST00000414202 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
RIC1-203ENST00000414202 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
RIC1-203ENST00000414202 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
RIC1-203ENST00000414202 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
RIC1-203ENST00000414202 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
RIC1-203ENST00000414202 MIER1Q8N108 512 aa18.8■□□□□ 0.6
RIC1-203ENST00000414202 ABCC9O60706 1549 aa18.78■□□□□ 0.6
RIC1-203ENST00000414202 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
RIC1-203ENST00000414202 A0A0G2JS52 829 aa18.74■□□□□ 0.59
RIC1-203ENST00000414202 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
RIC1-203ENST00000414202 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
RIC1-203ENST00000414202 NEFMP07197 916 aa18.69■□□□□ 0.58
RIC1-203ENST00000414202 RTN4Q9NQC3 1192 aaKnown RBP18.68■□□□□ 0.58
RIC1-203ENST00000414202 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.58
RIC1-203ENST00000414202 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.58
RIC1-203ENST00000414202 ANP32BQ92688 251 aaKnown RBP18.62■□□□□ 0.57
RIC1-203ENST00000414202 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
RIC1-203ENST00000414202 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
RIC1-203ENST00000414202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.575e-6■□□□□ 9.4
RIC1-203ENST00000414202 TULP1O00294 542 aaPredicted RBP18.58■□□□□ 0.56
RIC1-203ENST00000414202 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
RIC1-203ENST00000414202 ZBTB7CA1YPR0 619 aa18.56■□□□□ 0.56
RIC1-203ENST00000414202 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
RIC1-203ENST00000414202 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
RIC1-203ENST00000414202 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
RIC1-203ENST00000414202 TAOK2Q9UL54 1235 aa18.48■□□□□ 0.55
RIC1-203ENST00000414202 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
RIC1-203ENST00000414202 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
RIC1-203ENST00000414202 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
RIC1-203ENST00000414202 WDR43Q15061 677 aaKnown RBP eCLIP18.4■□□□□ 0.54
RIC1-203ENST00000414202 GLIPR1L2Q4G1C9 344 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms