RNA–Protein interactions for RNA: ENST00000270172.7

DNMT3L-201, Transcript of DNA methyltransferase 3 like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DNMT3L, Length 1,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3L-201ENST00000270172 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
DNMT3L-201ENST00000270172 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
DNMT3L-201ENST00000270172 ABCC9O60706 1549 aa26.58■■□□□ 1.85
DNMT3L-201ENST00000270172 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
DNMT3L-201ENST00000270172 DCAF1Q9Y4B6 1507 aa25.91■■□□□ 1.74
DNMT3L-201ENST00000270172 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
DNMT3L-201ENST00000270172 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
DNMT3L-201ENST00000270172 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
DNMT3L-201ENST00000270172 NACADO15069 1562 aa25.5■■□□□ 1.67
DNMT3L-201ENST00000270172 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
DNMT3L-201ENST00000270172 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
DNMT3L-201ENST00000270172 PABPN1Q86U42 306 aaKnown RBP eCLIP24.92■■□□□ 1.58
DNMT3L-201ENST00000270172 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
DNMT3L-201ENST00000270172 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
DNMT3L-201ENST00000270172 BICRAQ9NZM4 1560 aa24.75■■□□□ 1.55
DNMT3L-201ENST00000270172 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
DNMT3L-201ENST00000270172 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
DNMT3L-201ENST00000270172 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
DNMT3L-201ENST00000270172 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
DNMT3L-201ENST00000270172 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
DNMT3L-201ENST00000270172 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
DNMT3L-201ENST00000270172 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
DNMT3L-201ENST00000270172 WIZO95785 1651 aa24.02■■□□□ 1.44
DNMT3L-201ENST00000270172 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
DNMT3L-201ENST00000270172 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
DNMT3L-201ENST00000270172 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
DNMT3L-201ENST00000270172 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
DNMT3L-201ENST00000270172 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
DNMT3L-201ENST00000270172 ATAD2BQ9ULI0 1458 aa23.6■■□□□ 1.37
DNMT3L-201ENST00000270172 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
DNMT3L-201ENST00000270172 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
DNMT3L-201ENST00000270172 NCAPD3P42695 1498 aa23.58■■□□□ 1.36
DNMT3L-201ENST00000270172 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
DNMT3L-201ENST00000270172 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
DNMT3L-201ENST00000270172 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
DNMT3L-201ENST00000270172 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
DNMT3L-201ENST00000270172 HRCP23327 699 aa23.28■■□□□ 1.32
DNMT3L-201ENST00000270172 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
DNMT3L-201ENST00000270172 FAM9AQ8IZU1 332 aaPredicted RBP23.2■■□□□ 1.3
DNMT3L-201ENST00000270172 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
DNMT3L-201ENST00000270172 EEA1Q15075 1411 aa23.14■■□□□ 1.29
DNMT3L-201ENST00000270172 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
DNMT3L-201ENST00000270172 NESP48681 1621 aa23.02■■□□□ 1.28
DNMT3L-201ENST00000270172 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
DNMT3L-201ENST00000270172 SOGA1O94964 1423 aa22.92■■□□□ 1.26
DNMT3L-201ENST00000270172 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
DNMT3L-201ENST00000270172 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
DNMT3L-201ENST00000270172 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
DNMT3L-201ENST00000270172 TNIKQ9UKE5 1360 aa22.86■■□□□ 1.25
DNMT3L-201ENST00000270172 KIF21BO75037 1637 aa22.83■■□□□ 1.25
DNMT3L-201ENST00000270172 TOP2BQ02880 1626 aa22.83■■□□□ 1.24
DNMT3L-201ENST00000270172 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.24
DNMT3L-201ENST00000270172 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
DNMT3L-201ENST00000270172 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
DNMT3L-201ENST00000270172 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
DNMT3L-201ENST00000270172 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
DNMT3L-201ENST00000270172 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
DNMT3L-201ENST00000270172 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
DNMT3L-201ENST00000270172 CFTRP13569 1480 aa22.76■■□□□ 1.23
DNMT3L-201ENST00000270172 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
DNMT3L-201ENST00000270172 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
DNMT3L-201ENST00000270172 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
DNMT3L-201ENST00000270172 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
DNMT3L-201ENST00000270172 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.21
DNMT3L-201ENST00000270172 CUX2O14529 1486 aa22.59■■□□□ 1.21
DNMT3L-201ENST00000270172 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
DNMT3L-201ENST00000270172 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
DNMT3L-201ENST00000270172 CUX1P39880 1505 aa22.54■■□□□ 1.2
DNMT3L-201ENST00000270172 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
DNMT3L-201ENST00000270172 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
DNMT3L-201ENST00000270172 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
DNMT3L-201ENST00000270172 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
DNMT3L-201ENST00000270172 CLIP1P30622 1438 aa22.43■■□□□ 1.18
DNMT3L-201ENST00000270172 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
DNMT3L-201ENST00000270172 WDR62O43379 1518 aa22.43■■□□□ 1.18
DNMT3L-201ENST00000270172 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.18
DNMT3L-201ENST00000270172 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
DNMT3L-201ENST00000270172 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
DNMT3L-201ENST00000270172 TOPBP1Q92547 1522 aa22.27■■□□□ 1.15
DNMT3L-201ENST00000270172 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
DNMT3L-201ENST00000270172 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
DNMT3L-201ENST00000270172 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
DNMT3L-201ENST00000270172 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
DNMT3L-201ENST00000270172 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
DNMT3L-201ENST00000270172 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
DNMT3L-201ENST00000270172 APLP2Q06481 763 aa22.09■■□□□ 1.13
DNMT3L-201ENST00000270172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
DNMT3L-201ENST00000270172 IGF1RP08069 1367 aa22.06■■□□□ 1.12
DNMT3L-201ENST00000270172 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
DNMT3L-201ENST00000270172 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
DNMT3L-201ENST00000270172 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
DNMT3L-201ENST00000270172 ABCA10Q8WWZ4 1543 aa22.02■■□□□ 1.12
DNMT3L-201ENST00000270172 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
DNMT3L-201ENST00000270172 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
DNMT3L-201ENST00000270172 CUL7Q14999 1698 aa21.98■■□□□ 1.11
DNMT3L-201ENST00000270172 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
DNMT3L-201ENST00000270172 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
DNMT3L-201ENST00000270172 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
DNMT3L-201ENST00000270172 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
DNMT3L-201ENST00000270172 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms