RNA–Protein interactions for RNA: ENST00000403131.6

PROM2-203, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 2,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-203ENST00000403131 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
PROM2-203ENST00000403131 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
PROM2-203ENST00000403131 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
PROM2-203ENST00000403131 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
PROM2-203ENST00000403131 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
PROM2-203ENST00000403131 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
PROM2-203ENST00000403131 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
PROM2-203ENST00000403131 HRCP23327 699 aa24.03■■□□□ 1.44
PROM2-203ENST00000403131 PCGF6Q9BYE7 350 aa23.95■■□□□ 1.42
PROM2-203ENST00000403131 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
PROM2-203ENST00000403131 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
PROM2-203ENST00000403131 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
PROM2-203ENST00000403131 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
PROM2-203ENST00000403131 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
PROM2-203ENST00000403131 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
PROM2-203ENST00000403131 TRIM26Q12899 539 aaPredicted RBP23.05■■□□□ 1.28
PROM2-203ENST00000403131 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
PROM2-203ENST00000403131 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
PROM2-203ENST00000403131 TRIM41Q8WV44 630 aa23.02■■□□□ 1.27
PROM2-203ENST00000403131 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
PROM2-203ENST00000403131 ABCC9O60706 1549 aa22.89■■□□□ 1.26
PROM2-203ENST00000403131 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
PROM2-203ENST00000403131 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
PROM2-203ENST00000403131 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.22
PROM2-203ENST00000403131 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
PROM2-203ENST00000403131 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
PROM2-203ENST00000403131 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
PROM2-203ENST00000403131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
PROM2-203ENST00000403131 WIZO95785 1651 aa22.38■■□□□ 1.17
PROM2-203ENST00000403131 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
PROM2-203ENST00000403131 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
PROM2-203ENST00000403131 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
PROM2-203ENST00000403131 ABCC8Q09428 1581 aa22.14■■□□□ 1.14
PROM2-203ENST00000403131 NACADO15069 1562 aa22.11■■□□□ 1.13
PROM2-203ENST00000403131 MYT1Q01538 1121 aa22.05■■□□□ 1.12
PROM2-203ENST00000403131 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
PROM2-203ENST00000403131 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
PROM2-203ENST00000403131 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
PROM2-203ENST00000403131 SOGA1O94964 1423 aa21.99■■□□□ 1.11
PROM2-203ENST00000403131 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
PROM2-203ENST00000403131 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
PROM2-203ENST00000403131 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
PROM2-203ENST00000403131 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
PROM2-203ENST00000403131 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
PROM2-203ENST00000403131 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
PROM2-203ENST00000403131 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
PROM2-203ENST00000403131 YTHDC1Q96MU7 727 aaKnown RBP21.82■■□□□ 1.08
PROM2-203ENST00000403131 CENPBP07199 599 aaPredicted RBP21.81■■□□□ 1.08
PROM2-203ENST00000403131 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
PROM2-203ENST00000403131 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
PROM2-203ENST00000403131 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
PROM2-203ENST00000403131 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
PROM2-203ENST00000403131 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
PROM2-203ENST00000403131 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
PROM2-203ENST00000403131 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
PROM2-203ENST00000403131 UNC13AQ9UPW8 1703 aa21.58■■□□□ 1.05
PROM2-203ENST00000403131 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
PROM2-203ENST00000403131 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
PROM2-203ENST00000403131 MIER1Q8N108 512 aa21.51■■□□□ 1.03
PROM2-203ENST00000403131 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
PROM2-203ENST00000403131 CLIP1P30622 1438 aa21.42■■□□□ 1.02
PROM2-203ENST00000403131 APLP2Q06481 763 aa21.42■■□□□ 1.02
PROM2-203ENST00000403131 EEA1Q15075 1411 aa21.4■■□□□ 1.02
PROM2-203ENST00000403131 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
PROM2-203ENST00000403131 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
PROM2-203ENST00000403131 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
PROM2-203ENST00000403131 ITGAEP38570 1179 aa21.26■□□□□ 0.99
PROM2-203ENST00000403131 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
PROM2-203ENST00000403131 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
PROM2-203ENST00000403131 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
PROM2-203ENST00000403131 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
PROM2-203ENST00000403131 KIF21BO75037 1637 aa21.16■□□□□ 0.98
PROM2-203ENST00000403131 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
PROM2-203ENST00000403131 DHX57Q6P158 1386 aaKnown RBP21.02■□□□□ 0.96
PROM2-203ENST00000403131 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
PROM2-203ENST00000403131 SUPT16HQ9Y5B9 1047 aaKnown RBP20.95■□□□□ 0.94
PROM2-203ENST00000403131 KCNH8Q96L42 1107 aa20.95■□□□□ 0.94
PROM2-203ENST00000403131 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
PROM2-203ENST00000403131 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
PROM2-203ENST00000403131 P3H3Q8IVL6 736 aa20.89■□□□□ 0.94
PROM2-203ENST00000403131 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
PROM2-203ENST00000403131 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
PROM2-203ENST00000403131 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
PROM2-203ENST00000403131 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
PROM2-203ENST00000403131 CUX1P39880 1505 aa20.85■□□□□ 0.93
PROM2-203ENST00000403131 HIRIP3Q9BW71 556 aaPredicted RBP20.84■□□□□ 0.93
PROM2-203ENST00000403131 BCANQ96GW7 911 aa20.8■□□□□ 0.92
PROM2-203ENST00000403131 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
PROM2-203ENST00000403131 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
PROM2-203ENST00000403131 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
PROM2-203ENST00000403131 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
PROM2-203ENST00000403131 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
PROM2-203ENST00000403131 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
PROM2-203ENST00000403131 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
PROM2-203ENST00000403131 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
PROM2-203ENST00000403131 RAB3GAP2Q9H2M9 1393 aa20.73■□□□□ 0.91
PROM2-203ENST00000403131 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
PROM2-203ENST00000403131 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
PROM2-203ENST00000403131 CUX2O14529 1486 aa20.68■□□□□ 0.9
PROM2-203ENST00000403131 PHLDB1Q86UU1 1377 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms