RNA–Protein interactions for RNA: ENST00000426961.1

ZNF239-203, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF239, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-203ENST00000426961 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
ZNF239-203ENST00000426961 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
ZNF239-203ENST00000426961 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
ZNF239-203ENST00000426961 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
ZNF239-203ENST00000426961 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
ZNF239-203ENST00000426961 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
ZNF239-203ENST00000426961 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
ZNF239-203ENST00000426961 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
ZNF239-203ENST00000426961 ABCC9O60706 1549 aa25.79■■□□□ 1.72
ZNF239-203ENST00000426961 NACADO15069 1562 aa25.69■■□□□ 1.7
ZNF239-203ENST00000426961 SCRIBQ14160 1630 aa25.58■■□□□ 1.68
ZNF239-203ENST00000426961 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
ZNF239-203ENST00000426961 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
ZNF239-203ENST00000426961 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
ZNF239-203ENST00000426961 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
ZNF239-203ENST00000426961 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
ZNF239-203ENST00000426961 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
ZNF239-203ENST00000426961 BAZ1AQ9NRL2 1556 aaPredicted RBP24.72■■□□□ 1.55
ZNF239-203ENST00000426961 WIZO95785 1651 aa24.66■■□□□ 1.54
ZNF239-203ENST00000426961 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
ZNF239-203ENST00000426961 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
ZNF239-203ENST00000426961 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
ZNF239-203ENST00000426961 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
ZNF239-203ENST00000426961 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
ZNF239-203ENST00000426961 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
ZNF239-203ENST00000426961 TRIM41Q8WV44 630 aa24.2■■□□□ 1.47
ZNF239-203ENST00000426961 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
ZNF239-203ENST00000426961 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
ZNF239-203ENST00000426961 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
ZNF239-203ENST00000426961 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
ZNF239-203ENST00000426961 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
ZNF239-203ENST00000426961 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
ZNF239-203ENST00000426961 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
ZNF239-203ENST00000426961 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
ZNF239-203ENST00000426961 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
ZNF239-203ENST00000426961 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
ZNF239-203ENST00000426961 SOGA1O94964 1423 aa23.51■■□□□ 1.35
ZNF239-203ENST00000426961 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
ZNF239-203ENST00000426961 EEA1Q15075 1411 aa23.5■■□□□ 1.35
ZNF239-203ENST00000426961 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
ZNF239-203ENST00000426961 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
ZNF239-203ENST00000426961 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
ZNF239-203ENST00000426961 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
ZNF239-203ENST00000426961 CFTRP13569 1480 aa23.37■■□□□ 1.33
ZNF239-203ENST00000426961 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
ZNF239-203ENST00000426961 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
ZNF239-203ENST00000426961 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
ZNF239-203ENST00000426961 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
ZNF239-203ENST00000426961 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
ZNF239-203ENST00000426961 HRCP23327 699 aa23.23■■□□□ 1.31
ZNF239-203ENST00000426961 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
ZNF239-203ENST00000426961 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
ZNF239-203ENST00000426961 CUX1P39880 1505 aa23.19■■□□□ 1.3
ZNF239-203ENST00000426961 KIF21BO75037 1637 aa23.18■■□□□ 1.3
ZNF239-203ENST00000426961 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
ZNF239-203ENST00000426961 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
ZNF239-203ENST00000426961 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
ZNF239-203ENST00000426961 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
ZNF239-203ENST00000426961 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
ZNF239-203ENST00000426961 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
ZNF239-203ENST00000426961 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
ZNF239-203ENST00000426961 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
ZNF239-203ENST00000426961 FANCD2Q9BXW9 1451 aa22.91■■□□□ 1.26
ZNF239-203ENST00000426961 PPARGC1BQ86YN6 1023 aaKnown RBP22.89■■□□□ 1.25
ZNF239-203ENST00000426961 CLIP1P30622 1438 aa22.87■■□□□ 1.25
ZNF239-203ENST00000426961 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
ZNF239-203ENST00000426961 NESP48681 1621 aa22.83■■□□□ 1.25
ZNF239-203ENST00000426961 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
ZNF239-203ENST00000426961 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
ZNF239-203ENST00000426961 CUX2O14529 1486 aa22.77■■□□□ 1.24
ZNF239-203ENST00000426961 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
ZNF239-203ENST00000426961 IGF1RP08069 1367 aa22.74■■□□□ 1.23
ZNF239-203ENST00000426961 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
ZNF239-203ENST00000426961 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
ZNF239-203ENST00000426961 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
ZNF239-203ENST00000426961 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
ZNF239-203ENST00000426961 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
ZNF239-203ENST00000426961 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
ZNF239-203ENST00000426961 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
ZNF239-203ENST00000426961 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
ZNF239-203ENST00000426961 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
ZNF239-203ENST00000426961 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
ZNF239-203ENST00000426961 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
ZNF239-203ENST00000426961 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
ZNF239-203ENST00000426961 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
ZNF239-203ENST00000426961 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
ZNF239-203ENST00000426961 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.19
ZNF239-203ENST00000426961 APLP2Q06481 763 aa22.47■■□□□ 1.19
ZNF239-203ENST00000426961 CUL7Q14999 1698 aa22.44■■□□□ 1.18
ZNF239-203ENST00000426961 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
ZNF239-203ENST00000426961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
ZNF239-203ENST00000426961 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
ZNF239-203ENST00000426961 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
ZNF239-203ENST00000426961 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
ZNF239-203ENST00000426961 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
ZNF239-203ENST00000426961 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
ZNF239-203ENST00000426961 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
ZNF239-203ENST00000426961 CTTNBP2Q8WZ74 1663 aa22.27■■□□□ 1.16
ZNF239-203ENST00000426961 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
ZNF239-203ENST00000426961 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms