RNA–Protein interactions for RNA: ENST00000269399.5

CBX2-201, Transcript of chromobox 2, humanhuman

TSL 1 (best) BASIC

Gene CBX2, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-201ENST00000269399 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
CBX2-201ENST00000269399 ABCC9O60706 1549 aa38■■■■□ 3.67
CBX2-201ENST00000269399 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.57
CBX2-201ENST00000269399 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
CBX2-201ENST00000269399 RB1CC1Q8TDY2 1594 aa35.82■■■■□ 3.32
CBX2-201ENST00000269399 NACADO15069 1562 aa35.42■■■■□ 3.26
CBX2-201ENST00000269399 PABPN1Q86U42 306 aaKnown RBP eCLIP35.33■■■■□ 3.25
CBX2-201ENST00000269399 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
CBX2-201ENST00000269399 UNC13AQ9UPW8 1703 aa35.1■■■■□ 3.21
CBX2-201ENST00000269399 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
CBX2-201ENST00000269399 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
CBX2-201ENST00000269399 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
CBX2-201ENST00000269399 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.07
CBX2-201ENST00000269399 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
CBX2-201ENST00000269399 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
CBX2-201ENST00000269399 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
CBX2-201ENST00000269399 SCRIBQ14160 1630 aa34.07■■■■□ 3.04
CBX2-201ENST00000269399 EIF4G1Q04637 1599 aaKnown RBP34.05■■■■□ 3.04
CBX2-201ENST00000269399 DNAJC5Q9H3Z4 198 aa33.61■■■□□ 2.97
CBX2-201ENST00000269399 CUX2O14529 1486 aa32.9■■■□□ 2.86
CBX2-201ENST00000269399 ERCC6Q03468 1493 aa32.78■■■□□ 2.84
CBX2-201ENST00000269399 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
CBX2-201ENST00000269399 ATAD2BQ9ULI0 1458 aa32.6■■■□□ 2.81
CBX2-201ENST00000269399 NESP48681 1621 aa32.51■■■□□ 2.8
CBX2-201ENST00000269399 HMGXB3Q12766 1538 aa32.43■■■□□ 2.78
CBX2-201ENST00000269399 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
CBX2-201ENST00000269399 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
CBX2-201ENST00000269399 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
CBX2-201ENST00000269399 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
CBX2-201ENST00000269399 BAZ1AQ9NRL2 1556 aaPredicted RBP32.12■■■□□ 2.73
CBX2-201ENST00000269399 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
CBX2-201ENST00000269399 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
CBX2-201ENST00000269399 KIF21AQ7Z4S6 1674 aa32.03■■■□□ 2.72
CBX2-201ENST00000269399 MROH2BQ7Z745 1585 aa31.94■■■□□ 2.7
CBX2-201ENST00000269399 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
CBX2-201ENST00000269399 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
CBX2-201ENST00000269399 CADPSQ9ULU8 1353 aa31.73■■■□□ 2.67
CBX2-201ENST00000269399 MRC2Q9UBG0 1479 aa31.7■■■□□ 2.66
CBX2-201ENST00000269399 WDR62O43379 1518 aa31.65■■■□□ 2.66
CBX2-201ENST00000269399 WIZO95785 1651 aa31.52■■■□□ 2.64
CBX2-201ENST00000269399 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
CBX2-201ENST00000269399 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
CBX2-201ENST00000269399 OSCARQ8IYS5 282 aa31.33■■■□□ 2.61
CBX2-201ENST00000269399 CFTRP13569 1480 aa31.25■■■□□ 2.59
CBX2-201ENST00000269399 URB2Q14146 1524 aaKnown RBP31.2■■■□□ 2.59
CBX2-201ENST00000269399 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
CBX2-201ENST00000269399 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
CBX2-201ENST00000269399 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
CBX2-201ENST00000269399 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
CBX2-201ENST00000269399 TOP2AP11388 1531 aaKnown RBP31.02■■■□□ 2.56
CBX2-201ENST00000269399 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
CBX2-201ENST00000269399 ARHGEF11O15085 1522 aa30.86■■■□□ 2.53
CBX2-201ENST00000269399 PRDM2Q13029 1718 aa30.85■■■□□ 2.53
CBX2-201ENST00000269399 IFT140Q96RY7 1462 aa30.83■■■□□ 2.53
CBX2-201ENST00000269399 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
CBX2-201ENST00000269399 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
CBX2-201ENST00000269399 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
CBX2-201ENST00000269399 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
CBX2-201ENST00000269399 CHD1O14646 1710 aa30.58■■■□□ 2.49
CBX2-201ENST00000269399 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.485e-7■■■■□ 19.9
CBX2-201ENST00000269399 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
CBX2-201ENST00000269399 ARAP1Q96P48 1450 aa30.54■■■□□ 2.48
CBX2-201ENST00000269399 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
CBX2-201ENST00000269399 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
CBX2-201ENST00000269399 TRHP20396 242 aaPredicted RBP30.5■■■□□ 2.47
CBX2-201ENST00000269399 FBLN2P98095 1184 aa30.45■■■□□ 2.47
CBX2-201ENST00000269399 POLA1P09884 1462 aaPredicted RBP30.38■■■□□ 2.45
CBX2-201ENST00000269399 RAD54L2Q9Y4B4 1467 aa30.33■■■□□ 2.45
CBX2-201ENST00000269399 TDRD9Q8NDG6 1382 aaKnown RBP30.29■■■□□ 2.44
CBX2-201ENST00000269399 SOGA1O94964 1423 aa30.22■■■□□ 2.43
CBX2-201ENST00000269399 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
CBX2-201ENST00000269399 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
CBX2-201ENST00000269399 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
CBX2-201ENST00000269399 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
CBX2-201ENST00000269399 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
CBX2-201ENST00000269399 WDR97A6NE52 1622 aa30.05■■■□□ 2.4
CBX2-201ENST00000269399 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
CBX2-201ENST00000269399 CUX1P39880 1505 aa30.02■■■□□ 2.4
CBX2-201ENST00000269399 GRIN2BQ13224 1484 aa30■■■□□ 2.39
CBX2-201ENST00000269399 AEBP2Q6ZN18 517 aaPredicted RBP29.99■■■□□ 2.39
CBX2-201ENST00000269399 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
CBX2-201ENST00000269399 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
CBX2-201ENST00000269399 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
CBX2-201ENST00000269399 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
CBX2-201ENST00000269399 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
CBX2-201ENST00000269399 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
CBX2-201ENST00000269399 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
CBX2-201ENST00000269399 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
CBX2-201ENST00000269399 NUP160Q12769 1436 aa29.57■■■□□ 2.32
CBX2-201ENST00000269399 ADAMTS12P58397 1594 aa29.56■■■□□ 2.32
CBX2-201ENST00000269399 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
CBX2-201ENST00000269399 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
CBX2-201ENST00000269399 KIF13AQ9H1H9 1805 aa29.46■■■□□ 2.31
CBX2-201ENST00000269399 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
CBX2-201ENST00000269399 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
CBX2-201ENST00000269399 PRG4Q92954 1404 aaPredicted RBP29.34■■■□□ 2.29
CBX2-201ENST00000269399 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
CBX2-201ENST00000269399 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
CBX2-201ENST00000269399 JPH4Q96JJ6 628 aa29.26■■■□□ 2.27
CBX2-201ENST00000269399 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms