RNA–Protein interactions for RNA: ENST00000506081.5

TSC22D3-213, Transcript of TSC22 domain family member 3, humanhuman

TSL 5 BASIC

Gene TSC22D3, Length 956 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-213ENST00000506081 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
TSC22D3-213ENST00000506081 CCDC180Q9P1Z9 1646 aa35.75■■■■□ 3.31
TSC22D3-213ENST00000506081 ABCC9O60706 1549 aa35.44■■■■□ 3.26
TSC22D3-213ENST00000506081 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
TSC22D3-213ENST00000506081 NACADO15069 1562 aa33.72■■■□□ 2.99
TSC22D3-213ENST00000506081 DCAF8L2P0C7V8 631 aa33.59■■■□□ 2.97
TSC22D3-213ENST00000506081 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
TSC22D3-213ENST00000506081 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
TSC22D3-213ENST00000506081 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
TSC22D3-213ENST00000506081 PABPN1Q86U42 306 aaKnown RBP eCLIP33■■■□□ 2.87
TSC22D3-213ENST00000506081 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
TSC22D3-213ENST00000506081 DNAJC5BQ9UF47 199 aa32.9■■■□□ 2.86
TSC22D3-213ENST00000506081 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
TSC22D3-213ENST00000506081 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
TSC22D3-213ENST00000506081 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
TSC22D3-213ENST00000506081 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
TSC22D3-213ENST00000506081 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
TSC22D3-213ENST00000506081 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
TSC22D3-213ENST00000506081 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
TSC22D3-213ENST00000506081 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
TSC22D3-213ENST00000506081 SMARCA2P51531 1590 aa31.02■■■□□ 2.56
TSC22D3-213ENST00000506081 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
TSC22D3-213ENST00000506081 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
TSC22D3-213ENST00000506081 HMGXB3Q12766 1538 aa30.92■■■□□ 2.54
TSC22D3-213ENST00000506081 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
TSC22D3-213ENST00000506081 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
TSC22D3-213ENST00000506081 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
TSC22D3-213ENST00000506081 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
TSC22D3-213ENST00000506081 CUX2O14529 1486 aa30.51■■■□□ 2.48
TSC22D3-213ENST00000506081 NESP48681 1621 aa30.47■■■□□ 2.47
TSC22D3-213ENST00000506081 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
TSC22D3-213ENST00000506081 WIZO95785 1651 aa30.34■■■□□ 2.45
TSC22D3-213ENST00000506081 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
TSC22D3-213ENST00000506081 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
TSC22D3-213ENST00000506081 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
TSC22D3-213ENST00000506081 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
TSC22D3-213ENST00000506081 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
TSC22D3-213ENST00000506081 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
TSC22D3-213ENST00000506081 TOP2AP11388 1531 aaKnown RBP30.02■■■□□ 2.4
TSC22D3-213ENST00000506081 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
TSC22D3-213ENST00000506081 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
TSC22D3-213ENST00000506081 CFTRP13569 1480 aa29.86■■■□□ 2.37
TSC22D3-213ENST00000506081 WDR62O43379 1518 aa29.83■■■□□ 2.37
TSC22D3-213ENST00000506081 FANCD2Q9BXW9 1451 aa29.83■■■□□ 2.37
TSC22D3-213ENST00000506081 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
TSC22D3-213ENST00000506081 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
TSC22D3-213ENST00000506081 URB2Q14146 1524 aaKnown RBP29.52■■■□□ 2.32
TSC22D3-213ENST00000506081 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
TSC22D3-213ENST00000506081 TOPBP1Q92547 1522 aa29.27■■■□□ 2.28
TSC22D3-213ENST00000506081 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
TSC22D3-213ENST00000506081 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
TSC22D3-213ENST00000506081 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
TSC22D3-213ENST00000506081 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
TSC22D3-213ENST00000506081 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
TSC22D3-213ENST00000506081 SUPT5HO00267 1087 aaKnown RBP29.02■■■□□ 2.24
TSC22D3-213ENST00000506081 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
TSC22D3-213ENST00000506081 TRIM41Q8WV44 630 aa28.99■■■□□ 2.23
TSC22D3-213ENST00000506081 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
TSC22D3-213ENST00000506081 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.22
TSC22D3-213ENST00000506081 SOGA1O94964 1423 aa28.87■■■□□ 2.21
TSC22D3-213ENST00000506081 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
TSC22D3-213ENST00000506081 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
TSC22D3-213ENST00000506081 CUX1P39880 1505 aa28.83■■■□□ 2.21
TSC22D3-213ENST00000506081 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
TSC22D3-213ENST00000506081 CHD1O14646 1710 aa28.76■■■□□ 2.19
TSC22D3-213ENST00000506081 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
TSC22D3-213ENST00000506081 FBLN2P98095 1184 aa28.74■■■□□ 2.19
TSC22D3-213ENST00000506081 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
TSC22D3-213ENST00000506081 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
TSC22D3-213ENST00000506081 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
TSC22D3-213ENST00000506081 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
TSC22D3-213ENST00000506081 SNAPC4Q5SXM2 1469 aa28.65■■■□□ 2.18
TSC22D3-213ENST00000506081 GRIN2BQ13224 1484 aa28.63■■■□□ 2.17
TSC22D3-213ENST00000506081 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
TSC22D3-213ENST00000506081 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
TSC22D3-213ENST00000506081 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
TSC22D3-213ENST00000506081 GAPVD1Q14C86 1478 aa28.54■■■□□ 2.16
TSC22D3-213ENST00000506081 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
TSC22D3-213ENST00000506081 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
TSC22D3-213ENST00000506081 WRNQ14191 1432 aaPredicted RBP eCLIP28.51■■■□□ 2.15
TSC22D3-213ENST00000506081 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
TSC22D3-213ENST00000506081 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
TSC22D3-213ENST00000506081 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
TSC22D3-213ENST00000506081 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
TSC22D3-213ENST00000506081 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
TSC22D3-213ENST00000506081 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
TSC22D3-213ENST00000506081 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
TSC22D3-213ENST00000506081 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
TSC22D3-213ENST00000506081 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
TSC22D3-213ENST00000506081 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
TSC22D3-213ENST00000506081 FHAD1B1AJZ9 1412 aa28.2■■■□□ 2.11
TSC22D3-213ENST00000506081 NUP160Q12769 1436 aa28.11■■■□□ 2.09
TSC22D3-213ENST00000506081 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
TSC22D3-213ENST00000506081 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
TSC22D3-213ENST00000506081 SHROOM2Q13796 1616 aa27.97■■■□□ 2.07
TSC22D3-213ENST00000506081 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
TSC22D3-213ENST00000506081 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
TSC22D3-213ENST00000506081 CUL7Q14999 1698 aa27.89■■■□□ 2.06
TSC22D3-213ENST00000506081 RUSC2Q8N2Y8 1516 aa27.86■■■□□ 2.05
TSC22D3-213ENST00000506081 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms