RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
HLA-DPA1-242ENST00000419277 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
HLA-DPA1-242ENST00000419277 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
HLA-DPA1-242ENST00000419277 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
HLA-DPA1-242ENST00000419277 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
HLA-DPA1-242ENST00000419277 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
HLA-DPA1-242ENST00000419277 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
HLA-DPA1-242ENST00000419277 NACADO15069 1562 aa25.59■■□□□ 1.69
HLA-DPA1-242ENST00000419277 ABCC9O60706 1549 aa25.31■■□□□ 1.64
HLA-DPA1-242ENST00000419277 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
HLA-DPA1-242ENST00000419277 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
HLA-DPA1-242ENST00000419277 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
HLA-DPA1-242ENST00000419277 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
HLA-DPA1-242ENST00000419277 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
HLA-DPA1-242ENST00000419277 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
HLA-DPA1-242ENST00000419277 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
HLA-DPA1-242ENST00000419277 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
HLA-DPA1-242ENST00000419277 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
HLA-DPA1-242ENST00000419277 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
HLA-DPA1-242ENST00000419277 WIZO95785 1651 aa24.32■■□□□ 1.48
HLA-DPA1-242ENST00000419277 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
HLA-DPA1-242ENST00000419277 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
HLA-DPA1-242ENST00000419277 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
HLA-DPA1-242ENST00000419277 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
HLA-DPA1-242ENST00000419277 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
HLA-DPA1-242ENST00000419277 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
HLA-DPA1-242ENST00000419277 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
HLA-DPA1-242ENST00000419277 PABPN1Q86U42 306 aaKnown RBP eCLIP23.82■■□□□ 1.4
HLA-DPA1-242ENST00000419277 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
HLA-DPA1-242ENST00000419277 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
HLA-DPA1-242ENST00000419277 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
HLA-DPA1-242ENST00000419277 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
HLA-DPA1-242ENST00000419277 EEA1Q15075 1411 aa23.49■■□□□ 1.35
HLA-DPA1-242ENST00000419277 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
HLA-DPA1-242ENST00000419277 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
HLA-DPA1-242ENST00000419277 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
HLA-DPA1-242ENST00000419277 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
HLA-DPA1-242ENST00000419277 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
HLA-DPA1-242ENST00000419277 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
HLA-DPA1-242ENST00000419277 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.3
HLA-DPA1-242ENST00000419277 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
HLA-DPA1-242ENST00000419277 CFTRP13569 1480 aa23.15■■□□□ 1.3
HLA-DPA1-242ENST00000419277 KIF21BO75037 1637 aa23.11■■□□□ 1.29
HLA-DPA1-242ENST00000419277 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
HLA-DPA1-242ENST00000419277 SOGA1O94964 1423 aa23.09■■□□□ 1.29
HLA-DPA1-242ENST00000419277 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
HLA-DPA1-242ENST00000419277 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
HLA-DPA1-242ENST00000419277 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
HLA-DPA1-242ENST00000419277 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
HLA-DPA1-242ENST00000419277 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
HLA-DPA1-242ENST00000419277 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
HLA-DPA1-242ENST00000419277 HRCP23327 699 aa22.95■■□□□ 1.26
HLA-DPA1-242ENST00000419277 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
HLA-DPA1-242ENST00000419277 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
HLA-DPA1-242ENST00000419277 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
HLA-DPA1-242ENST00000419277 CUX1P39880 1505 aa22.89■■□□□ 1.25
HLA-DPA1-242ENST00000419277 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
HLA-DPA1-242ENST00000419277 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
HLA-DPA1-242ENST00000419277 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
HLA-DPA1-242ENST00000419277 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
HLA-DPA1-242ENST00000419277 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
HLA-DPA1-242ENST00000419277 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
HLA-DPA1-242ENST00000419277 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
HLA-DPA1-242ENST00000419277 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
HLA-DPA1-242ENST00000419277 CLIP1P30622 1438 aa22.64■■□□□ 1.22
HLA-DPA1-242ENST00000419277 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
HLA-DPA1-242ENST00000419277 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
HLA-DPA1-242ENST00000419277 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.2
HLA-DPA1-242ENST00000419277 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
HLA-DPA1-242ENST00000419277 CUX2O14529 1486 aa22.5■■□□□ 1.19
HLA-DPA1-242ENST00000419277 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
HLA-DPA1-242ENST00000419277 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
HLA-DPA1-242ENST00000419277 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
HLA-DPA1-242ENST00000419277 CUL7Q14999 1698 aa22.42■■□□□ 1.18
HLA-DPA1-242ENST00000419277 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
HLA-DPA1-242ENST00000419277 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
HLA-DPA1-242ENST00000419277 IGF1RP08069 1367 aa22.38■■□□□ 1.17
HLA-DPA1-242ENST00000419277 NESP48681 1621 aa22.37■■□□□ 1.17
HLA-DPA1-242ENST00000419277 ARAP1Q96P48 1450 aa22.33■■□□□ 1.17
HLA-DPA1-242ENST00000419277 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
HLA-DPA1-242ENST00000419277 APLP2Q06481 763 aa22.31■■□□□ 1.16
HLA-DPA1-242ENST00000419277 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
HLA-DPA1-242ENST00000419277 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
HLA-DPA1-242ENST00000419277 ABCA5Q8WWZ7 1642 aa22.26■■□□□ 1.15
HLA-DPA1-242ENST00000419277 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
HLA-DPA1-242ENST00000419277 MAP3K1Q13233 1512 aa22.23■■□□□ 1.15
HLA-DPA1-242ENST00000419277 EFCAB5A4FU69 1503 aa22.22■■□□□ 1.15
HLA-DPA1-242ENST00000419277 CTTNBP2Q8WZ74 1663 aa22.22■■□□□ 1.15
HLA-DPA1-242ENST00000419277 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
HLA-DPA1-242ENST00000419277 RAD54L2Q9Y4B4 1467 aa22.19■■□□□ 1.14
HLA-DPA1-242ENST00000419277 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
HLA-DPA1-242ENST00000419277 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.13
HLA-DPA1-242ENST00000419277 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
HLA-DPA1-242ENST00000419277 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
HLA-DPA1-242ENST00000419277 CFAP43Q8NDM7 1665 aa22.05■■□□□ 1.12
HLA-DPA1-242ENST00000419277 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.12
HLA-DPA1-242ENST00000419277 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
HLA-DPA1-242ENST00000419277 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
HLA-DPA1-242ENST00000419277 WDR62O43379 1518 aa22.03■■□□□ 1.12
HLA-DPA1-242ENST00000419277 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms