RNA–Protein interactions for RNA: ENST00000322602.9

MFAP3-201, Transcript of microfibril associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MFAP3, Length 2,891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFAP3-201ENST00000322602 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
MFAP3-201ENST00000322602 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
MFAP3-201ENST00000322602 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
MFAP3-201ENST00000322602 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
MFAP3-201ENST00000322602 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
MFAP3-201ENST00000322602 MYO15BQ96JP2 1530 aa24.44■■□□□ 1.5
MFAP3-201ENST00000322602 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
MFAP3-201ENST00000322602 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
MFAP3-201ENST00000322602 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
MFAP3-201ENST00000322602 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
MFAP3-201ENST00000322602 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
MFAP3-201ENST00000322602 HRCP23327 699 aa23.91■■□□□ 1.42
MFAP3-201ENST00000322602 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
MFAP3-201ENST00000322602 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
MFAP3-201ENST00000322602 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
MFAP3-201ENST00000322602 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
MFAP3-201ENST00000322602 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
MFAP3-201ENST00000322602 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
MFAP3-201ENST00000322602 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
MFAP3-201ENST00000322602 ABCC9O60706 1549 aa23.1■■□□□ 1.29
MFAP3-201ENST00000322602 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
MFAP3-201ENST00000322602 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
MFAP3-201ENST00000322602 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
MFAP3-201ENST00000322602 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
MFAP3-201ENST00000322602 WIZO95785 1651 aa22.67■■□□□ 1.22
MFAP3-201ENST00000322602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
MFAP3-201ENST00000322602 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
MFAP3-201ENST00000322602 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
MFAP3-201ENST00000322602 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
MFAP3-201ENST00000322602 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
MFAP3-201ENST00000322602 NACADO15069 1562 aa22.38■■□□□ 1.17
MFAP3-201ENST00000322602 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
MFAP3-201ENST00000322602 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
MFAP3-201ENST00000322602 SOGA1O94964 1423 aa22.27■■□□□ 1.16
MFAP3-201ENST00000322602 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
MFAP3-201ENST00000322602 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
MFAP3-201ENST00000322602 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
MFAP3-201ENST00000322602 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
MFAP3-201ENST00000322602 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
MFAP3-201ENST00000322602 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
MFAP3-201ENST00000322602 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
MFAP3-201ENST00000322602 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
MFAP3-201ENST00000322602 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
MFAP3-201ENST00000322602 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
MFAP3-201ENST00000322602 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
MFAP3-201ENST00000322602 SMARCA4P51532 1647 aa22■■□□□ 1.11
MFAP3-201ENST00000322602 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
MFAP3-201ENST00000322602 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
MFAP3-201ENST00000322602 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
MFAP3-201ENST00000322602 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
MFAP3-201ENST00000322602 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
MFAP3-201ENST00000322602 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
MFAP3-201ENST00000322602 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
MFAP3-201ENST00000322602 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
MFAP3-201ENST00000322602 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
MFAP3-201ENST00000322602 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
MFAP3-201ENST00000322602 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
MFAP3-201ENST00000322602 MIER1Q8N108 512 aa21.66■■□□□ 1.06
MFAP3-201ENST00000322602 CLIP1P30622 1438 aa21.62■■□□□ 1.05
MFAP3-201ENST00000322602 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
MFAP3-201ENST00000322602 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
MFAP3-201ENST00000322602 APLP2Q06481 763 aa21.55■■□□□ 1.04
MFAP3-201ENST00000322602 EEA1Q15075 1411 aa21.53■■□□□ 1.04
MFAP3-201ENST00000322602 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
MFAP3-201ENST00000322602 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
MFAP3-201ENST00000322602 ITGAEP38570 1179 aa21.5■■□□□ 1.03
MFAP3-201ENST00000322602 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
MFAP3-201ENST00000322602 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
MFAP3-201ENST00000322602 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
MFAP3-201ENST00000322602 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
MFAP3-201ENST00000322602 KIF21BO75037 1637 aa21.36■■□□□ 1.01
MFAP3-201ENST00000322602 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
MFAP3-201ENST00000322602 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
MFAP3-201ENST00000322602 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
MFAP3-201ENST00000322602 DHX57Q6P158 1386 aaKnown RBP21.2■□□□□ 0.98
MFAP3-201ENST00000322602 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
MFAP3-201ENST00000322602 ATP1B4Q9UN42 357 aaPredicted RBP21.17■□□□□ 0.98
MFAP3-201ENST00000322602 TOP2BQ02880 1626 aa21.14■□□□□ 0.98
MFAP3-201ENST00000322602 CUX1P39880 1505 aa21.12■□□□□ 0.97
MFAP3-201ENST00000322602 PRXQ9BXM0 1461 aa21.1■□□□□ 0.97
MFAP3-201ENST00000322602 HIRIP3Q9BW71 556 aaPredicted RBP21.1■□□□□ 0.97
MFAP3-201ENST00000322602 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
MFAP3-201ENST00000322602 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
MFAP3-201ENST00000322602 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
MFAP3-201ENST00000322602 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
MFAP3-201ENST00000322602 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
MFAP3-201ENST00000322602 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
MFAP3-201ENST00000322602 CUX2O14529 1486 aa20.93■□□□□ 0.94
MFAP3-201ENST00000322602 RAB3GAP2Q9H2M9 1393 aa20.92■□□□□ 0.94
MFAP3-201ENST00000322602 BCANQ96GW7 911 aa20.91■□□□□ 0.94
MFAP3-201ENST00000322602 IGF1RP08069 1367 aa20.9■□□□□ 0.94
MFAP3-201ENST00000322602 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
MFAP3-201ENST00000322602 SUPT16HQ9Y5B9 1047 aaKnown RBP20.89■□□□□ 0.94
MFAP3-201ENST00000322602 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.93
MFAP3-201ENST00000322602 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
MFAP3-201ENST00000322602 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
MFAP3-201ENST00000322602 PHLDB1Q86UU1 1377 aa20.84■□□□□ 0.93
MFAP3-201ENST00000322602 CFTRP13569 1480 aa20.84■□□□□ 0.93
MFAP3-201ENST00000322602 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
MFAP3-201ENST00000322602 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms