RNA–Protein interactions for RNA: ENST00000519811.5

DENND3-211, Transcript of DENN domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DENND3, Length 5,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-211ENST00000519811 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
DENND3-211ENST00000519811 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
DENND3-211ENST00000519811 MYT1Q01538 1121 aa22.85■■□□□ 1.25
DENND3-211ENST00000519811 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
DENND3-211ENST00000519811 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
DENND3-211ENST00000519811 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
DENND3-211ENST00000519811 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
DENND3-211ENST00000519811 ERICH6Q7L0X2 663 aa21.74■■□□□ 1.07
DENND3-211ENST00000519811 APLP2Q06481 763 aa21.67■■□□□ 1.06
DENND3-211ENST00000519811 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
DENND3-211ENST00000519811 CCER1Q8TC90 406 aaPredicted RBP21.41■■□□□ 1.02
DENND3-211ENST00000519811 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
DENND3-211ENST00000519811 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
DENND3-211ENST00000519811 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
DENND3-211ENST00000519811 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
DENND3-211ENST00000519811 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
DENND3-211ENST00000519811 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
DENND3-211ENST00000519811 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
DENND3-211ENST00000519811 RANGAP1P46060 587 aaPredicted RBP20.74■□□□□ 0.91
DENND3-211ENST00000519811 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
DENND3-211ENST00000519811 NEFLP07196 543 aa20.71■□□□□ 0.91
DENND3-211ENST00000519811 HRCP23327 699 aa20.58■□□□□ 0.88
DENND3-211ENST00000519811 ABCC9O60706 1549 aa20.47■□□□□ 0.87
DENND3-211ENST00000519811 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
DENND3-211ENST00000519811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
DENND3-211ENST00000519811 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
DENND3-211ENST00000519811 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
DENND3-211ENST00000519811 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
DENND3-211ENST00000519811 DAXXQ9UER7 740 aaPredicted RBP20.2■□□□□ 0.82
DENND3-211ENST00000519811 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
DENND3-211ENST00000519811 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
DENND3-211ENST00000519811 GLIPR1L2Q4G1C9 344 aa19.92■□□□□ 0.78
DENND3-211ENST00000519811 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
DENND3-211ENST00000519811 EIF5BO60841 1220 aaKnown RBP19.89■□□□□ 0.77
DENND3-211ENST00000519811 ITGAEP38570 1179 aa19.8■□□□□ 0.76
DENND3-211ENST00000519811 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
DENND3-211ENST00000519811 FBLN2P98095 1184 aa19.79■□□□□ 0.76
DENND3-211ENST00000519811 DIEXFQ68CQ4 756 aaKnown RBP19.73■□□□□ 0.75
DENND3-211ENST00000519811 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
DENND3-211ENST00000519811 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
DENND3-211ENST00000519811 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
DENND3-211ENST00000519811 BCANQ96GW7 911 aa19.58■□□□□ 0.73
DENND3-211ENST00000519811 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
DENND3-211ENST00000519811 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
DENND3-211ENST00000519811 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
DENND3-211ENST00000519811 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
DENND3-211ENST00000519811 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
DENND3-211ENST00000519811 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
DENND3-211ENST00000519811 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
DENND3-211ENST00000519811 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
DENND3-211ENST00000519811 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
DENND3-211ENST00000519811 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
DENND3-211ENST00000519811 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
DENND3-211ENST00000519811 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
DENND3-211ENST00000519811 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
DENND3-211ENST00000519811 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
DENND3-211ENST00000519811 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
DENND3-211ENST00000519811 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
DENND3-211ENST00000519811 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
DENND3-211ENST00000519811 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
DENND3-211ENST00000519811 ZNF777Q9ULD5 760 aaPredicted RBP19.13■□□□□ 0.65
DENND3-211ENST00000519811 NEFMP07197 916 aa19.11■□□□□ 0.65
DENND3-211ENST00000519811 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
DENND3-211ENST00000519811 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
DENND3-211ENST00000519811 NBR1Q14596 966 aa19.1■□□□□ 0.65
DENND3-211ENST00000519811 NACADO15069 1562 aa19.1■□□□□ 0.65
DENND3-211ENST00000519811 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
DENND3-211ENST00000519811 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
DENND3-211ENST00000519811 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
DENND3-211ENST00000519811 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
DENND3-211ENST00000519811 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
DENND3-211ENST00000519811 ANP32BQ92688 251 aaKnown RBP18.97■□□□□ 0.63
DENND3-211ENST00000519811 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
DENND3-211ENST00000519811 FKBP8Q14318 412 aa18.93■□□□□ 0.62
DENND3-211ENST00000519811 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
DENND3-211ENST00000519811 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
DENND3-211ENST00000519811 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
DENND3-211ENST00000519811 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
DENND3-211ENST00000519811 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
DENND3-211ENST00000519811 ANP32CO43423 234 aa18.85■□□□□ 0.61
DENND3-211ENST00000519811 SLC24A1O60721 1099 aa18.84■□□□□ 0.61
DENND3-211ENST00000519811 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
DENND3-211ENST00000519811 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
DENND3-211ENST00000519811 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
DENND3-211ENST00000519811 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
DENND3-211ENST00000519811 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
DENND3-211ENST00000519811 CDK11BP21127 795 aaKnown RBP18.71■□□□□ 0.59
DENND3-211ENST00000519811 EEA1Q15075 1411 aa18.7■□□□□ 0.58
DENND3-211ENST00000519811 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
DENND3-211ENST00000519811 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
DENND3-211ENST00000519811 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
DENND3-211ENST00000519811 ERICH6BQ5W0A0 696 aa18.67■□□□□ 0.58
DENND3-211ENST00000519811 ARXQ96QS3 562 aa18.66■□□□□ 0.58
DENND3-211ENST00000519811 NAP1L5Q96NT1 182 aaPredicted RBP18.66■□□□□ 0.58
DENND3-211ENST00000519811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
DENND3-211ENST00000519811 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
DENND3-211ENST00000519811 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
DENND3-211ENST00000519811 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
DENND3-211ENST00000519811 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
DENND3-211ENST00000519811 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms