RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
ALX4-201ENST00000329255 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
ALX4-201ENST00000329255 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
ALX4-201ENST00000329255 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
ALX4-201ENST00000329255 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
ALX4-201ENST00000329255 APLP2Q06481 763 aa21.27■■□□□ 1
ALX4-201ENST00000329255 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.97
ALX4-201ENST00000329255 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
ALX4-201ENST00000329255 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
ALX4-201ENST00000329255 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
ALX4-201ENST00000329255 MYT1Q01538 1121 aa20.91■□□□□ 0.94
ALX4-201ENST00000329255 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
ALX4-201ENST00000329255 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.93
ALX4-201ENST00000329255 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
ALX4-201ENST00000329255 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
ALX4-201ENST00000329255 NEFLP07196 543 aa20.55■□□□□ 0.88
ALX4-201ENST00000329255 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
ALX4-201ENST00000329255 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
ALX4-201ENST00000329255 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
ALX4-201ENST00000329255 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
ALX4-201ENST00000329255 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
ALX4-201ENST00000329255 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.8
ALX4-201ENST00000329255 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.77
ALX4-201ENST00000329255 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
ALX4-201ENST00000329255 HRCP23327 699 aa19.78■□□□□ 0.76
ALX4-201ENST00000329255 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
ALX4-201ENST00000329255 RTL5Q5HYW3 569 aaPredicted RBP19.65■□□□□ 0.74
ALX4-201ENST00000329255 ITGAEP38570 1179 aa19.62■□□□□ 0.73
ALX4-201ENST00000329255 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.73
ALX4-201ENST00000329255 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
ALX4-201ENST00000329255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
ALX4-201ENST00000329255 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
ALX4-201ENST00000329255 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
ALX4-201ENST00000329255 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
ALX4-201ENST00000329255 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
ALX4-201ENST00000329255 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
ALX4-201ENST00000329255 LOC105371045A0A1W2PR82 267 aa19.31■□□□□ 0.68
ALX4-201ENST00000329255 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
ALX4-201ENST00000329255 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
ALX4-201ENST00000329255 BCANQ96GW7 911 aa19.11■□□□□ 0.65
ALX4-201ENST00000329255 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
ALX4-201ENST00000329255 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.65
ALX4-201ENST00000329255 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.65
ALX4-201ENST00000329255 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
ALX4-201ENST00000329255 ANP32CO43423 234 aa19.05■□□□□ 0.64
ALX4-201ENST00000329255 NEUROD1Q13562 356 aa19■□□□□ 0.63
ALX4-201ENST00000329255 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
ALX4-201ENST00000329255 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
ALX4-201ENST00000329255 ZNF326Q5BKZ1 582 aaKnown RBP18.86■□□□□ 0.61
ALX4-201ENST00000329255 NEFMP07197 916 aa18.78■□□□□ 0.6
ALX4-201ENST00000329255 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
ALX4-201ENST00000329255 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
ALX4-201ENST00000329255 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
ALX4-201ENST00000329255 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
ALX4-201ENST00000329255 ANP32BQ92688 251 aaKnown RBP18.72■□□□□ 0.59
ALX4-201ENST00000329255 GLIPR1L2Q4G1C9 344 aa18.7■□□□□ 0.58
ALX4-201ENST00000329255 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
ALX4-201ENST00000329255 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
ALX4-201ENST00000329255 ABCC9O60706 1549 aa18.56■□□□□ 0.56
ALX4-201ENST00000329255 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
ALX4-201ENST00000329255 FKBP8Q14318 412 aa18.52■□□□□ 0.56
ALX4-201ENST00000329255 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
ALX4-201ENST00000329255 FBLN2P98095 1184 aa18.41■□□□□ 0.54
ALX4-201ENST00000329255 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
ALX4-201ENST00000329255 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
ALX4-201ENST00000329255 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
ALX4-201ENST00000329255 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
ALX4-201ENST00000329255 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
ALX4-201ENST00000329255 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
ALX4-201ENST00000329255 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
ALX4-201ENST00000329255 NBR1Q14596 966 aa18.31■□□□□ 0.52
ALX4-201ENST00000329255 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
ALX4-201ENST00000329255 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
ALX4-201ENST00000329255 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
ALX4-201ENST00000329255 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
ALX4-201ENST00000329255 ARXQ96QS3 562 aa18.22■□□□□ 0.51
ALX4-201ENST00000329255 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
ALX4-201ENST00000329255 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
ALX4-201ENST00000329255 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
ALX4-201ENST00000329255 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
ALX4-201ENST00000329255 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
ALX4-201ENST00000329255 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
ALX4-201ENST00000329255 CDK11BP21127 795 aaKnown RBP18.11■□□□□ 0.49
ALX4-201ENST00000329255 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
ALX4-201ENST00000329255 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
ALX4-201ENST00000329255 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
ALX4-201ENST00000329255 BECN1Q14457 450 aa18.08■□□□□ 0.48
ALX4-201ENST00000329255 TRIM44Q96DX7 344 aaPredicted RBP18.07■□□□□ 0.48
ALX4-201ENST00000329255 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
ALX4-201ENST00000329255 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
ALX4-201ENST00000329255 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
ALX4-201ENST00000329255 GOLGA6L22H0YM25 854 aa18.02■□□□□ 0.47
ALX4-201ENST00000329255 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
ALX4-201ENST00000329255 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
ALX4-201ENST00000329255 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
ALX4-201ENST00000329255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
ALX4-201ENST00000329255 MIER1Q8N108 512 aa17.95■□□□□ 0.46
ALX4-201ENST00000329255 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
ALX4-201ENST00000329255 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
ALX4-201ENST00000329255 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms