RNA–Protein interactions for RNA: ENST00000554954.1

AL583722.3-202, humanhuman

TSL 4 BASIC

Gene AL583722.3, Length 486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL583722.3-202ENST00000554954 NISCHQ9Y2I1 1504 aa40.12■■■■■ 4.01
AL583722.3-202ENST00000554954 ABCC9O60706 1549 aa35.85■■■■□ 3.33
AL583722.3-202ENST00000554954 CCDC180Q9P1Z9 1646 aa35.85■■■■□ 3.33
AL583722.3-202ENST00000554954 RB1CC1Q8TDY2 1594 aa34.15■■■■□ 3.06
AL583722.3-202ENST00000554954 NACADO15069 1562 aa33.95■■■■□ 3.03
AL583722.3-202ENST00000554954 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
AL583722.3-202ENST00000554954 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
AL583722.3-202ENST00000554954 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
AL583722.3-202ENST00000554954 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
AL583722.3-202ENST00000554954 ZCCHC6Q5VYS8 1495 aaKnown RBP33.26■■■□□ 2.92
AL583722.3-202ENST00000554954 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
AL583722.3-202ENST00000554954 DCAF1Q9Y4B6 1507 aa33.14■■■□□ 2.9
AL583722.3-202ENST00000554954 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
AL583722.3-202ENST00000554954 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
AL583722.3-202ENST00000554954 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
AL583722.3-202ENST00000554954 CC2D2AQ9P2K1 1620 aa32.33■■■□□ 2.77
AL583722.3-202ENST00000554954 EIF4G1Q04637 1599 aaKnown RBP32.31■■■□□ 2.76
AL583722.3-202ENST00000554954 CECR2Q9BXF3 1484 aa32.3■■■□□ 2.76
AL583722.3-202ENST00000554954 NCAPD3P42695 1498 aa31.38■■■□□ 2.61
AL583722.3-202ENST00000554954 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
AL583722.3-202ENST00000554954 SMARCA4P51532 1647 aa31.22■■■□□ 2.59
AL583722.3-202ENST00000554954 SMARCA2P51531 1590 aa31.2■■■□□ 2.58
AL583722.3-202ENST00000554954 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
AL583722.3-202ENST00000554954 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
AL583722.3-202ENST00000554954 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
AL583722.3-202ENST00000554954 ERCC6Q03468 1493 aa30.98■■■□□ 2.55
AL583722.3-202ENST00000554954 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
AL583722.3-202ENST00000554954 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
AL583722.3-202ENST00000554954 CUX2O14529 1486 aa30.85■■■□□ 2.53
AL583722.3-202ENST00000554954 NESP48681 1621 aa30.8■■■□□ 2.52
AL583722.3-202ENST00000554954 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
AL583722.3-202ENST00000554954 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
AL583722.3-202ENST00000554954 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
AL583722.3-202ENST00000554954 WIZO95785 1651 aa30.48■■■□□ 2.47
AL583722.3-202ENST00000554954 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
AL583722.3-202ENST00000554954 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
AL583722.3-202ENST00000554954 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
AL583722.3-202ENST00000554954 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
AL583722.3-202ENST00000554954 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
AL583722.3-202ENST00000554954 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
AL583722.3-202ENST00000554954 CFTRP13569 1480 aa30.11■■■□□ 2.41
AL583722.3-202ENST00000554954 CEP164Q9UPV0 1460 aa30.1■■■□□ 2.41
AL583722.3-202ENST00000554954 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
AL583722.3-202ENST00000554954 WDR62O43379 1518 aa30.07■■■□□ 2.4
AL583722.3-202ENST00000554954 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
AL583722.3-202ENST00000554954 URB2Q14146 1524 aaKnown RBP29.8■■■□□ 2.36
AL583722.3-202ENST00000554954 PRDM2Q13029 1718 aa29.61■■■□□ 2.33
AL583722.3-202ENST00000554954 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
AL583722.3-202ENST00000554954 IFT140Q96RY7 1462 aa29.51■■■□□ 2.31
AL583722.3-202ENST00000554954 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
AL583722.3-202ENST00000554954 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
AL583722.3-202ENST00000554954 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
AL583722.3-202ENST00000554954 ZNF608Q9ULD9 1512 aaPredicted RBP29.42■■■□□ 2.3
AL583722.3-202ENST00000554954 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.29
AL583722.3-202ENST00000554954 POLA1P09884 1462 aaPredicted RBP29.22■■■□□ 2.27
AL583722.3-202ENST00000554954 AQRO60306 1485 aaKnown RBP eCLIP29.2■■■□□ 2.26
AL583722.3-202ENST00000554954 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
AL583722.3-202ENST00000554954 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
AL583722.3-202ENST00000554954 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
AL583722.3-202ENST00000554954 SOGA1O94964 1423 aa29.13■■■□□ 2.25
AL583722.3-202ENST00000554954 RAD54L2Q9Y4B4 1467 aa29.12■■■□□ 2.25
AL583722.3-202ENST00000554954 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
AL583722.3-202ENST00000554954 FBLN2P98095 1184 aa29.06■■■□□ 2.24
AL583722.3-202ENST00000554954 FGD5Q6ZNL6 1462 aa29.05■■■□□ 2.24
AL583722.3-202ENST00000554954 CUX1P39880 1505 aa29.03■■■□□ 2.24
AL583722.3-202ENST00000554954 RIMBP3CA6NJZ7 1639 aa29■■■□□ 2.23
AL583722.3-202ENST00000554954 RIMBP3BA6NNM3 1639 aa29■■■□□ 2.23
AL583722.3-202ENST00000554954 RIMBP3Q9UFD9 1639 aa29■■■□□ 2.23
AL583722.3-202ENST00000554954 ARHGEF11O15085 1522 aa28.97■■■□□ 2.23
AL583722.3-202ENST00000554954 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
AL583722.3-202ENST00000554954 CHD1O14646 1710 aa28.9■■■□□ 2.22
AL583722.3-202ENST00000554954 SNAPC4Q5SXM2 1469 aa28.89■■■□□ 2.22
AL583722.3-202ENST00000554954 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
AL583722.3-202ENST00000554954 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
AL583722.3-202ENST00000554954 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
AL583722.3-202ENST00000554954 MAGI1Q96QZ7 1491 aaPredicted RBP28.83■■■□□ 2.21
AL583722.3-202ENST00000554954 GAPVD1Q14C86 1478 aa28.76■■■□□ 2.19
AL583722.3-202ENST00000554954 ABCA10Q8WWZ4 1543 aa28.74■■■□□ 2.19
AL583722.3-202ENST00000554954 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
AL583722.3-202ENST00000554954 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
AL583722.3-202ENST00000554954 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
AL583722.3-202ENST00000554954 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
AL583722.3-202ENST00000554954 CLASP1Q7Z460 1538 aa28.66■■■□□ 2.18
AL583722.3-202ENST00000554954 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
AL583722.3-202ENST00000554954 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
AL583722.3-202ENST00000554954 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
AL583722.3-202ENST00000554954 BIVM-ERCC5R4GMW8 1640 aa28.53■■■□□ 2.16
AL583722.3-202ENST00000554954 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
AL583722.3-202ENST00000554954 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
AL583722.3-202ENST00000554954 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
AL583722.3-202ENST00000554954 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
AL583722.3-202ENST00000554954 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
AL583722.3-202ENST00000554954 NUP160Q12769 1436 aa28.36■■■□□ 2.13
AL583722.3-202ENST00000554954 CEP170Q5SW79 1584 aa28.3■■■□□ 2.12
AL583722.3-202ENST00000554954 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
AL583722.3-202ENST00000554954 SHROOM2Q13796 1616 aa28.14■■■□□ 2.1
AL583722.3-202ENST00000554954 JPH4Q96JJ6 628 aa28.14■■■□□ 2.1
AL583722.3-202ENST00000554954 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
AL583722.3-202ENST00000554954 PRG4Q92954 1404 aaPredicted RBP28.11■■■□□ 2.09
AL583722.3-202ENST00000554954 IGF1RP08069 1367 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms