RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
MYCN-202ENST00000638417 CCDC180Q9P1Z9 1646 aa31.96■■■□□ 2.71
MYCN-202ENST00000638417 ABCC9O60706 1549 aa31.8■■■□□ 2.68
MYCN-202ENST00000638417 RB1CC1Q8TDY2 1594 aa30.32■■■□□ 2.44
MYCN-202ENST00000638417 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
MYCN-202ENST00000638417 NACADO15069 1562 aa30.14■■■□□ 2.42
MYCN-202ENST00000638417 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
MYCN-202ENST00000638417 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
MYCN-202ENST00000638417 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
MYCN-202ENST00000638417 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
MYCN-202ENST00000638417 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
MYCN-202ENST00000638417 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
MYCN-202ENST00000638417 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
MYCN-202ENST00000638417 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
MYCN-202ENST00000638417 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
MYCN-202ENST00000638417 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
MYCN-202ENST00000638417 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
MYCN-202ENST00000638417 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
MYCN-202ENST00000638417 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
MYCN-202ENST00000638417 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
MYCN-202ENST00000638417 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
MYCN-202ENST00000638417 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
MYCN-202ENST00000638417 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
MYCN-202ENST00000638417 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
MYCN-202ENST00000638417 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
MYCN-202ENST00000638417 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
MYCN-202ENST00000638417 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
MYCN-202ENST00000638417 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
MYCN-202ENST00000638417 NESP48681 1621 aa27.4■■□□□ 1.98
MYCN-202ENST00000638417 WIZO95785 1651 aa27.33■■□□□ 1.96
MYCN-202ENST00000638417 CUX2O14529 1486 aa27.2■■□□□ 1.94
MYCN-202ENST00000638417 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
MYCN-202ENST00000638417 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
MYCN-202ENST00000638417 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
MYCN-202ENST00000638417 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
MYCN-202ENST00000638417 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
MYCN-202ENST00000638417 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.92
MYCN-202ENST00000638417 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
MYCN-202ENST00000638417 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
MYCN-202ENST00000638417 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
MYCN-202ENST00000638417 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
MYCN-202ENST00000638417 CFTRP13569 1480 aa26.76■■□□□ 1.87
MYCN-202ENST00000638417 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
MYCN-202ENST00000638417 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
MYCN-202ENST00000638417 WDR62O43379 1518 aa26.69■■□□□ 1.86
MYCN-202ENST00000638417 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
MYCN-202ENST00000638417 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
MYCN-202ENST00000638417 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
MYCN-202ENST00000638417 TOPBP1Q92547 1522 aa26.26■■□□□ 1.8
MYCN-202ENST00000638417 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
MYCN-202ENST00000638417 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
MYCN-202ENST00000638417 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
MYCN-202ENST00000638417 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
MYCN-202ENST00000638417 OSCARQ8IYS5 282 aa26.05■■□□□ 1.76
MYCN-202ENST00000638417 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
MYCN-202ENST00000638417 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
MYCN-202ENST00000638417 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
MYCN-202ENST00000638417 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.75
MYCN-202ENST00000638417 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
MYCN-202ENST00000638417 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
MYCN-202ENST00000638417 CUX1P39880 1505 aa25.92■■□□□ 1.74
MYCN-202ENST00000638417 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
MYCN-202ENST00000638417 SOGA1O94964 1423 aa25.91■■□□□ 1.74
MYCN-202ENST00000638417 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
MYCN-202ENST00000638417 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
MYCN-202ENST00000638417 FBLN2P98095 1184 aa25.79■■□□□ 1.72
MYCN-202ENST00000638417 CHD1O14646 1710 aa25.79■■□□□ 1.72
MYCN-202ENST00000638417 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
MYCN-202ENST00000638417 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
MYCN-202ENST00000638417 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
MYCN-202ENST00000638417 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
MYCN-202ENST00000638417 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
MYCN-202ENST00000638417 ARHGEF11O15085 1522 aa25.64■■□□□ 1.7
MYCN-202ENST00000638417 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
MYCN-202ENST00000638417 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
MYCN-202ENST00000638417 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
MYCN-202ENST00000638417 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
MYCN-202ENST00000638417 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
MYCN-202ENST00000638417 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
MYCN-202ENST00000638417 MAGI1Q96QZ7 1491 aaPredicted RBP25.58■■□□□ 1.69
MYCN-202ENST00000638417 SYNJ1O43426 1573 aa25.58■■□□□ 1.69
MYCN-202ENST00000638417 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
MYCN-202ENST00000638417 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
MYCN-202ENST00000638417 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
MYCN-202ENST00000638417 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
MYCN-202ENST00000638417 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
MYCN-202ENST00000638417 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
MYCN-202ENST00000638417 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
MYCN-202ENST00000638417 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
MYCN-202ENST00000638417 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
MYCN-202ENST00000638417 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
MYCN-202ENST00000638417 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
MYCN-202ENST00000638417 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
MYCN-202ENST00000638417 NUP160Q12769 1436 aa25.19■■□□□ 1.62
MYCN-202ENST00000638417 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
MYCN-202ENST00000638417 ERCC6L2Q5T890 1561 aa25.14■■□□□ 1.61
MYCN-202ENST00000638417 TRHP20396 242 aaPredicted RBP25.13■■□□□ 1.61
MYCN-202ENST00000638417 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
MYCN-202ENST00000638417 SHROOM2Q13796 1616 aa25.05■■□□□ 1.6
MYCN-202ENST00000638417 IGF1RP08069 1367 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms