RNA–Protein interactions for RNA: ENST00000533448.1

CALCB-203, Transcript of calcitonin related polypeptide beta, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CALCB, Length 2,097 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCB-203ENST00000533448 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
CALCB-203ENST00000533448 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
CALCB-203ENST00000533448 ABCC9O60706 1549 aa28.19■■■□□ 2.1
CALCB-203ENST00000533448 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
CALCB-203ENST00000533448 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
CALCB-203ENST00000533448 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
CALCB-203ENST00000533448 NACADO15069 1562 aa27.3■■□□□ 1.96
CALCB-203ENST00000533448 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
CALCB-203ENST00000533448 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
CALCB-203ENST00000533448 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
CALCB-203ENST00000533448 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
CALCB-203ENST00000533448 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
CALCB-203ENST00000533448 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
CALCB-203ENST00000533448 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.83
CALCB-203ENST00000533448 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.74
CALCB-203ENST00000533448 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
CALCB-203ENST00000533448 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
CALCB-203ENST00000533448 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
CALCB-203ENST00000533448 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
CALCB-203ENST00000533448 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
CALCB-203ENST00000533448 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
CALCB-203ENST00000533448 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
CALCB-203ENST00000533448 WIZO95785 1651 aa25.46■■□□□ 1.67
CALCB-203ENST00000533448 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
CALCB-203ENST00000533448 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
CALCB-203ENST00000533448 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
CALCB-203ENST00000533448 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
CALCB-203ENST00000533448 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
CALCB-203ENST00000533448 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.62
CALCB-203ENST00000533448 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
CALCB-203ENST00000533448 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
CALCB-203ENST00000533448 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
CALCB-203ENST00000533448 NESP48681 1621 aa24.61■■□□□ 1.53
CALCB-203ENST00000533448 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
CALCB-203ENST00000533448 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
CALCB-203ENST00000533448 CFTRP13569 1480 aa24.49■■□□□ 1.51
CALCB-203ENST00000533448 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
CALCB-203ENST00000533448 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
CALCB-203ENST00000533448 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
CALCB-203ENST00000533448 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
CALCB-203ENST00000533448 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
CALCB-203ENST00000533448 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
CALCB-203ENST00000533448 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
CALCB-203ENST00000533448 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
CALCB-203ENST00000533448 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
CALCB-203ENST00000533448 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
CALCB-203ENST00000533448 CUX1P39880 1505 aa24.03■■□□□ 1.44
CALCB-203ENST00000533448 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
CALCB-203ENST00000533448 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
CALCB-203ENST00000533448 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
CALCB-203ENST00000533448 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
CALCB-203ENST00000533448 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
CALCB-203ENST00000533448 WDR62O43379 1518 aa23.93■■□□□ 1.42
CALCB-203ENST00000533448 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
CALCB-203ENST00000533448 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
CALCB-203ENST00000533448 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
CALCB-203ENST00000533448 POLA1P09884 1462 aaPredicted RBP23.8■■□□□ 1.4
CALCB-203ENST00000533448 CUX2O14529 1486 aa23.77■■□□□ 1.4
CALCB-203ENST00000533448 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
CALCB-203ENST00000533448 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
CALCB-203ENST00000533448 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
CALCB-203ENST00000533448 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
CALCB-203ENST00000533448 WDR97A6NE52 1622 aa23.67■■□□□ 1.38
CALCB-203ENST00000533448 SOGA1O94964 1423 aa23.66■■□□□ 1.38
CALCB-203ENST00000533448 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
CALCB-203ENST00000533448 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
CALCB-203ENST00000533448 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
CALCB-203ENST00000533448 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
CALCB-203ENST00000533448 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
CALCB-203ENST00000533448 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CALCB-203ENST00000533448 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
CALCB-203ENST00000533448 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
CALCB-203ENST00000533448 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
CALCB-203ENST00000533448 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
CALCB-203ENST00000533448 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
CALCB-203ENST00000533448 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
CALCB-203ENST00000533448 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
CALCB-203ENST00000533448 HRCP23327 699 aa23.31■■□□□ 1.32
CALCB-203ENST00000533448 IGF1RP08069 1367 aa23.3■■□□□ 1.32
CALCB-203ENST00000533448 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
CALCB-203ENST00000533448 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
CALCB-203ENST00000533448 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
CALCB-203ENST00000533448 EEA1Q15075 1411 aa23.23■■□□□ 1.31
CALCB-203ENST00000533448 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
CALCB-203ENST00000533448 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
CALCB-203ENST00000533448 CUL7Q14999 1698 aa23.19■■□□□ 1.3
CALCB-203ENST00000533448 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
CALCB-203ENST00000533448 CHD1O14646 1710 aa23.16■■□□□ 1.3
CALCB-203ENST00000533448 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
CALCB-203ENST00000533448 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
CALCB-203ENST00000533448 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
CALCB-203ENST00000533448 PRXQ9BXM0 1461 aa23.14■■□□□ 1.3
CALCB-203ENST00000533448 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
CALCB-203ENST00000533448 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
CALCB-203ENST00000533448 KIF21BO75037 1637 aa23.08■■□□□ 1.29
CALCB-203ENST00000533448 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
CALCB-203ENST00000533448 FBLN2P98095 1184 aa23.06■■□□□ 1.28
CALCB-203ENST00000533448 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
CALCB-203ENST00000533448 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
CALCB-203ENST00000533448 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms