Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-7■■■■□ 24.1
SND1Q7KZF4 ASAH1-207ENST00000519468 746 ntTSL 314.64□□□□□ -0.071e-9■■■■□ 24.1
SND1Q7KZF4 ASAH1-213ENST00000523744 5740 nt8.85□□□□□ -0.992e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-205ENST00000518629 1915 ntTSL 217.34■□□□□ 0.373e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-216ENST00000550627 2264 ntTSL 215.5■□□□□ 0.073e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.163e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-204ENST00000517734 2860 ntTSL 212.22□□□□□ -0.453e-6■■■■□ 24.1
SND1Q7KZF4 CYP4F12-206ENST00000546608 3256 ntTSL 210.86□□□□□ -0.673e-6■■■■□ 24.1
SND1Q7KZF4 F2RL1-202ENST00000514165 607 ntTSL 322.55■■□□□ 1.21e-6■■■■□ 24
SND1Q7KZF4 LCLAT1-208ENST00000476535 537 ntTSL 418.16■□□□□ 0.51e-6■■■■□ 24
SND1Q7KZF4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■■■□ 24
SND1Q7KZF4 SFT2D1-202ENST00000478705 659 ntTSL 216.98■□□□□ 0.311e-6■■■■□ 24
SND1Q7KZF4 SGCE-208ENST00000450385 815 ntTSL 316.58■□□□□ 0.241e-6■■■■□ 24
SND1Q7KZF4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.241e-6■■■■□ 24
SND1Q7KZF4 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)13.97□□□□□ -0.171e-6■■■■□ 24
SND1Q7KZF4 AQP3-202ENST00000463983 1109 ntTSL 213.46□□□□□ -0.251e-6■■■■□ 24
SND1Q7KZF4 SFT2D1-203ENST00000479490 2061 ntTSL 1 (best)12.65□□□□□ -0.381e-6■■■■□ 24
SND1Q7KZF4 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC11.24□□□□□ -0.611e-6■■■■□ 24
SND1Q7KZF4 LCLAT1-204ENST00000465200 582 ntTSL 310.95□□□□□ -0.661e-6■■■■□ 24
SND1Q7KZF4 ANPEP-205ENST00000559874 663 ntTSL 310.06□□□□□ -0.87e-18■■■■□ 24
SND1Q7KZF4 LCLAT1-207ENST00000476038 584 ntTSL 310.04□□□□□ -0.81e-6■■■■□ 24
SND1Q7KZF4 SFT2D1-205ENST00000488773 546 ntTSL 55.74□□□□□ -1.491e-6■■■■□ 24
SND1Q7KZF4 TSPAN6-203ENST00000496771 1025 ntTSL 320.23■□□□□ 0.832e-7■■■■□ 24
SND1Q7KZF4 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.61□□□□□ -1.192e-7■■■■□ 24
SND1Q7KZF4 UGGT1-206ENST00000465836 517 ntTSL 27.59□□□□□ -1.198e-23■■■■□ 24
SND1Q7KZF4 RAE1-208ENST00000492498 1156 ntTSL 517.64■□□□□ 0.413e-7■■■■□ 24
SND1Q7KZF4 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC12.47□□□□□ -0.413e-7■■■■□ 24
SND1Q7KZF4 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.453e-7■■■■□ 24
SND1Q7KZF4 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.483e-7■■■■□ 24
SND1Q7KZF4 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.813e-7■■■■□ 24
SND1Q7KZF4 BCAP31-205ENST00000430088 570 ntTSL 28.73□□□□□ -1.014e-15■■■■□ 24
SND1Q7KZF4 APOH-204ENST00000585162 407 ntTSL 25.44□□□□□ -1.543e-44■■■■□ 24
SND1Q7KZF4 CTSH-209ENST00000529612 574 ntTSL 412.91□□□□□ -0.341e-8■■■■□ 24
SND1Q7KZF4 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC10.47□□□□□ -0.732e-7■■■■□ 24
SND1Q7KZF4 CLU-209ENST00000522098 850 ntTSL 210.81□□□□□ -0.682e-17■■■■□ 24
SND1Q7KZF4 LIPA-201ENST00000282673 753 ntTSL 39.25□□□□□ -0.938e-7■■■■□ 24
SND1Q7KZF4 LGALS3BP-204ENST00000586720 1736 ntTSL 517.92■□□□□ 0.461e-33■■■■□ 23.9
SND1Q7KZF4 LGALS3BP-205ENST00000587251 2091 ntTSL 517.8■□□□□ 0.441e-33■■■■□ 23.9
SND1Q7KZF4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.71■□□□□ 0.431e-33■■■■□ 23.9
SND1Q7KZF4 LGALS3BP-207ENST00000587311 1905 ntTSL 217.62■□□□□ 0.411e-33■■■■□ 23.9
SND1Q7KZF4 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.131e-33■■■■□ 23.9
SND1Q7KZF4 SERPINA5-212ENST00000556775 829 ntTSL 510.59□□□□□ -0.713e-13■■■■□ 23.9
SND1Q7KZF4 CTSH-203ENST00000527138 798 ntTSL 417.53■□□□□ 0.41e-8■■■■□ 23.9
SND1Q7KZF4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.329e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-207ENST00000473699 1027 ntTSL 316.13■□□□□ 0.179e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-211ENST00000484320 1148 ntTSL 515.39■□□□□ 0.059e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-209ENST00000480176 1040 ntTSL 213.86□□□□□ -0.199e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-218ENST00000532074 1008 ntTSL 510.88□□□□□ -0.679e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-213ENST00000496742 825 ntTSL 3 BASIC10.19□□□□□ -0.789e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.869e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-212ENST00000488179 1712 ntTSL 58.63□□□□□ -1.039e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.46□□□□□ -1.069e-11■■■■□ 23.9
SND1Q7KZF4 SSR2-216ENST00000531790 476 ntTSL 57.39□□□□□ -1.239e-11■■■■□ 23.9
SND1Q7KZF4 HYOU1-210ENST00000531968 550 ntTSL 414.32□□□□□ -0.123e-10■■■■□ 23.9
SND1Q7KZF4 POR-203ENST00000412521 586 ntTSL 416.19■□□□□ 0.186e-11■■■■□ 23.9
SND1Q7KZF4 POR-215ENST00000453773 498 ntTSL 414.35□□□□□ -0.116e-11■■■■□ 23.9
SND1Q7KZF4 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.099e-8■■■■□ 23.9
SND1Q7KZF4 TAP2-203ENST00000464100 849 ntTSL 212.55□□□□□ -0.45e-9■■■■□ 23.9
SND1Q7KZF4 GYPA-205ENST00000508337 622 ntTSL 1 (best)9.16□□□□□ -0.943e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.62□□□□□ -1.033e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.063e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.233e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.36□□□□□ -1.233e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.66□□□□□ -1.343e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.393e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.483e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.12□□□□□ -1.593e-7■■■■□ 23.9
SND1Q7KZF4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.853e-7■■■■□ 23.9
SND1Q7KZF4 HYOU1-202ENST00000526656 862 ntTSL 324.78■■□□□ 1.563e-10■■■■□ 23.8
SND1Q7KZF4 M6PR-204ENST00000539143 650 ntTSL 514.1□□□□□ -0.155e-8■■■■□ 23.8
SND1Q7KZF4 M6PR-212ENST00000544193 255 ntTSL 310.4□□□□□ -0.747e-8■■■■□ 23.8
SND1Q7KZF4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.155e-10■■■■□ 23.8
SND1Q7KZF4 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.834e-8■■■■□ 23.8
SND1Q7KZF4 RPN2-207ENST00000462163 712 ntTSL 39.88□□□□□ -0.834e-23■■■■□ 23.8
SND1Q7KZF4 GSN-214ENST00000485767 6454 ntTSL 1 (best)11.66□□□□□ -0.541e-14■■■■□ 23.8
SND1Q7KZF4 TF-205ENST00000462495 582 ntTSL 28.59□□□□□ -1.031e-323■■■■□ 23.7
SND1Q7KZF4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.3■□□□□ 0.842e-6■■■■□ 23.7
SND1Q7KZF4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.583e-8■■■■□ 23.7
SND1Q7KZF4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.089e-8■■■■□ 23.7
SND1Q7KZF4 LAMB2-209ENST00000480640 563 ntTSL 315.37■□□□□ 0.051e-7■■■■□ 23.7
SND1Q7KZF4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.019e-8■■■■□ 23.7
SND1Q7KZF4 PDIA5-202ENST00000467157 2232 ntTSL 214.92□□□□□ -0.029e-9■■■■□ 23.7
SND1Q7KZF4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.88□□□□□ -0.032e-6■■■■□ 23.7
SND1Q7KZF4 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.68□□□□□ -0.222e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.242e-6■■■■□ 23.7
SND1Q7KZF4 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■■■□ 23.7
SND1Q7KZF4 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.422e-6■■■■□ 23.7
SND1Q7KZF4 LAMB2-218ENST00000538659 576 ntTSL 212.16□□□□□ -0.464e-9■■■■□ 23.7
SND1Q7KZF4 PDIA5-206ENST00000485208 499 ntTSL 511.35□□□□□ -0.599e-9■■■■□ 23.7
SND1Q7KZF4 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC11.26□□□□□ -0.612e-6■■■■□ 23.7
SND1Q7KZF4 STIM1-217ENST00000533445 447 ntTSL 510.33□□□□□ -0.762e-6■■■■□ 23.7
SND1Q7KZF4 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC10.24□□□□□ -0.772e-6■■■■□ 23.7
SND1Q7KZF4 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.782e-6■■■■□ 23.7
SND1Q7KZF4 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.792e-6■■■■□ 23.7
SND1Q7KZF4 CCNK-203ENST00000553865 5627 ntTSL 1 (best)9.96□□□□□ -0.812e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.912e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.232e-6■■■■□ 23.7
SND1Q7KZF4 PDIA5-203ENST00000469649 722 ntTSL 57.16□□□□□ -1.269e-9■■■■□ 23.7
SND1Q7KZF4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.07□□□□□ -1.282e-6■■■■□ 23.7
Retrieved 100 of 13,567 protein–RNA pairs in 75 ms