RNA–Protein interactions for RNA: ENST00000295702.8

SSR2-201, Transcript of signal sequence receptor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR2, Length 1,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-201ENST00000295702 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
SSR2-201ENST00000295702 ABCC9O60706 1549 aa19.04■□□□□ 0.64
SSR2-201ENST00000295702 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
SSR2-201ENST00000295702 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
SSR2-201ENST00000295702 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
SSR2-201ENST00000295702 NACADO15069 1562 aa17.79■□□□□ 0.44
SSR2-201ENST00000295702 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSR2-201ENST00000295702 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
SSR2-201ENST00000295702 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SSR2-201ENST00000295702 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
SSR2-201ENST00000295702 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
SSR2-201ENST00000295702 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
SSR2-201ENST00000295702 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
SSR2-201ENST00000295702 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
SSR2-201ENST00000295702 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
SSR2-201ENST00000295702 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
SSR2-201ENST00000295702 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
SSR2-201ENST00000295702 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
SSR2-201ENST00000295702 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
SSR2-201ENST00000295702 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
SSR2-201ENST00000295702 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
SSR2-201ENST00000295702 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
SSR2-201ENST00000295702 CUX2O14529 1486 aa16.46■□□□□ 0.23
SSR2-201ENST00000295702 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
SSR2-201ENST00000295702 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
SSR2-201ENST00000295702 NESP48681 1621 aa16.33■□□□□ 0.2
SSR2-201ENST00000295702 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
SSR2-201ENST00000295702 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
SSR2-201ENST00000295702 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
SSR2-201ENST00000295702 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
SSR2-201ENST00000295702 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
SSR2-201ENST00000295702 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
SSR2-201ENST00000295702 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
SSR2-201ENST00000295702 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
SSR2-201ENST00000295702 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
SSR2-201ENST00000295702 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
SSR2-201ENST00000295702 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
SSR2-201ENST00000295702 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
SSR2-201ENST00000295702 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
SSR2-201ENST00000295702 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
SSR2-201ENST00000295702 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
SSR2-201ENST00000295702 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
SSR2-201ENST00000295702 WDR62O43379 1518 aa15.89■□□□□ 0.13
SSR2-201ENST00000295702 WIZO95785 1651 aa15.86■□□□□ 0.13
SSR2-201ENST00000295702 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.11
SSR2-201ENST00000295702 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
SSR2-201ENST00000295702 CFTRP13569 1480 aa15.74■□□□□ 0.11
SSR2-201ENST00000295702 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SSR2-201ENST00000295702 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
SSR2-201ENST00000295702 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
SSR2-201ENST00000295702 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
SSR2-201ENST00000295702 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
SSR2-201ENST00000295702 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
SSR2-201ENST00000295702 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
SSR2-201ENST00000295702 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
SSR2-201ENST00000295702 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
SSR2-201ENST00000295702 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
SSR2-201ENST00000295702 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
SSR2-201ENST00000295702 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
SSR2-201ENST00000295702 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
SSR2-201ENST00000295702 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
SSR2-201ENST00000295702 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
SSR2-201ENST00000295702 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
SSR2-201ENST00000295702 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
SSR2-201ENST00000295702 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
SSR2-201ENST00000295702 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
SSR2-201ENST00000295702 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
SSR2-201ENST00000295702 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
SSR2-201ENST00000295702 CHD1O14646 1710 aa15.28■□□□□ 0.04
SSR2-201ENST00000295702 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
SSR2-201ENST00000295702 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
SSR2-201ENST00000295702 FBLN2P98095 1184 aa15.22■□□□□ 0.03
SSR2-201ENST00000295702 SOGA1O94964 1423 aa15.19■□□□□ 0.02
SSR2-201ENST00000295702 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
SSR2-201ENST00000295702 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
SSR2-201ENST00000295702 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
SSR2-201ENST00000295702 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
SSR2-201ENST00000295702 CUX1P39880 1505 aa15.12■□□□□ 0.01
SSR2-201ENST00000295702 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
SSR2-201ENST00000295702 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
SSR2-201ENST00000295702 WDR97A6NE52 1622 aa15.07■□□□□ 0
SSR2-201ENST00000295702 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
SSR2-201ENST00000295702 GRIN2BQ13224 1484 aa15.07■□□□□ 0
SSR2-201ENST00000295702 SYNJ2O15056 1496 aa15.05■□□□□ -0
SSR2-201ENST00000295702 SYNJ1O43426 1573 aa15.05■□□□□ -0
SSR2-201ENST00000295702 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
SSR2-201ENST00000295702 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
SSR2-201ENST00000295702 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SSR2-201ENST00000295702 PBRM1Q86U86 1689 aa14.95□□□□□ -0.02
SSR2-201ENST00000295702 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
SSR2-201ENST00000295702 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
SSR2-201ENST00000295702 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
SSR2-201ENST00000295702 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
SSR2-201ENST00000295702 NUP160Q12769 1436 aa14.89□□□□□ -0.03
SSR2-201ENST00000295702 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
SSR2-201ENST00000295702 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
SSR2-201ENST00000295702 ADAMTS12P58397 1594 aa14.84□□□□□ -0.03
SSR2-201ENST00000295702 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
SSR2-201ENST00000295702 EEA1Q15075 1411 aa14.82□□□□□ -0.04
SSR2-201ENST00000295702 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms