RNA–Protein interactions for RNA: ENST00000614008.4

TSPAN6-205, Transcript of tetraspanin 6, humanhuman

TSL 5 BASIC

Gene TSPAN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-205ENST00000614008 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
TSPAN6-205ENST00000614008 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
TSPAN6-205ENST00000614008 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
TSPAN6-205ENST00000614008 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
TSPAN6-205ENST00000614008 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
TSPAN6-205ENST00000614008 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
TSPAN6-205ENST00000614008 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
TSPAN6-205ENST00000614008 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
TSPAN6-205ENST00000614008 ABCC9O60706 1549 aa13.95□□□□□ -0.18
TSPAN6-205ENST00000614008 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
TSPAN6-205ENST00000614008 FOXD1Q16676 465 aa13.58□□□□□ -0.24
TSPAN6-205ENST00000614008 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
TSPAN6-205ENST00000614008 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
TSPAN6-205ENST00000614008 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
TSPAN6-205ENST00000614008 NACADO15069 1562 aa13.57□□□□□ -0.24
TSPAN6-205ENST00000614008 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
TSPAN6-205ENST00000614008 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
TSPAN6-205ENST00000614008 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
TSPAN6-205ENST00000614008 SCRIBQ14160 1630 aa13.21□□□□□ -0.29
TSPAN6-205ENST00000614008 MSH5O43196 834 aa13.18□□□□□ -0.3
TSPAN6-205ENST00000614008 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
TSPAN6-205ENST00000614008 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
TSPAN6-205ENST00000614008 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
TSPAN6-205ENST00000614008 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
TSPAN6-205ENST00000614008 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
TSPAN6-205ENST00000614008 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
TSPAN6-205ENST00000614008 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
TSPAN6-205ENST00000614008 SMARCA4P51532 1647 aa12.65□□□□□ -0.38
TSPAN6-205ENST00000614008 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
TSPAN6-205ENST00000614008 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
TSPAN6-205ENST00000614008 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
TSPAN6-205ENST00000614008 ADRA2BP18089 450 aa12.56□□□□□ -0.4
TSPAN6-205ENST00000614008 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
TSPAN6-205ENST00000614008 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
TSPAN6-205ENST00000614008 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
TSPAN6-205ENST00000614008 WIZO95785 1651 aa12.47□□□□□ -0.41
TSPAN6-205ENST00000614008 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
TSPAN6-205ENST00000614008 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
TSPAN6-205ENST00000614008 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
TSPAN6-205ENST00000614008 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
TSPAN6-205ENST00000614008 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
TSPAN6-205ENST00000614008 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
TSPAN6-205ENST00000614008 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
TSPAN6-205ENST00000614008 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
TSPAN6-205ENST00000614008 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
TSPAN6-205ENST00000614008 CUX2O14529 1486 aa12.21□□□□□ -0.45
TSPAN6-205ENST00000614008 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
TSPAN6-205ENST00000614008 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
TSPAN6-205ENST00000614008 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
TSPAN6-205ENST00000614008 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
TSPAN6-205ENST00000614008 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
TSPAN6-205ENST00000614008 ERCC6Q03468 1493 aa12.08□□□□□ -0.47
TSPAN6-205ENST00000614008 NESP48681 1621 aa12.08□□□□□ -0.48
TSPAN6-205ENST00000614008 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
TSPAN6-205ENST00000614008 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
TSPAN6-205ENST00000614008 CFTRP13569 1480 aa12.05□□□□□ -0.48
TSPAN6-205ENST00000614008 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
TSPAN6-205ENST00000614008 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
TSPAN6-205ENST00000614008 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
TSPAN6-205ENST00000614008 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
TSPAN6-205ENST00000614008 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
TSPAN6-205ENST00000614008 WDR62O43379 1518 aa11.87□□□□□ -0.51
TSPAN6-205ENST00000614008 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
TSPAN6-205ENST00000614008 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
TSPAN6-205ENST00000614008 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
TSPAN6-205ENST00000614008 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
TSPAN6-205ENST00000614008 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
TSPAN6-205ENST00000614008 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
TSPAN6-205ENST00000614008 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
TSPAN6-205ENST00000614008 CUX1P39880 1505 aa11.75□□□□□ -0.53
TSPAN6-205ENST00000614008 SYNJ1O43426 1573 aa11.71□□□□□ -0.53
TSPAN6-205ENST00000614008 POTEHQ6S545 545 aa11.71□□□□□ -0.53
TSPAN6-205ENST00000614008 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
TSPAN6-205ENST00000614008 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
TSPAN6-205ENST00000614008 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
TSPAN6-205ENST00000614008 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
TSPAN6-205ENST00000614008 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
TSPAN6-205ENST00000614008 SOCS7O14512 581 aa11.66□□□□□ -0.54
TSPAN6-205ENST00000614008 SOGA1O94964 1423 aa11.66□□□□□ -0.54
TSPAN6-205ENST00000614008 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
TSPAN6-205ENST00000614008 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
TSPAN6-205ENST00000614008 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
TSPAN6-205ENST00000614008 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
TSPAN6-205ENST00000614008 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
TSPAN6-205ENST00000614008 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
TSPAN6-205ENST00000614008 ABCA5Q8WWZ7 1642 aa11.58□□□□□ -0.56
TSPAN6-205ENST00000614008 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
TSPAN6-205ENST00000614008 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
TSPAN6-205ENST00000614008 GAPVD1Q14C86 1478 aa11.55□□□□□ -0.56
TSPAN6-205ENST00000614008 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
TSPAN6-205ENST00000614008 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
TSPAN6-205ENST00000614008 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
TSPAN6-205ENST00000614008 CHD1O14646 1710 aa11.53□□□□□ -0.56
TSPAN6-205ENST00000614008 KIF27Q86VH2 1401 aa11.52□□□□□ -0.56
TSPAN6-205ENST00000614008 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
TSPAN6-205ENST00000614008 CUL7Q14999 1698 aa11.5□□□□□ -0.57
TSPAN6-205ENST00000614008 KCNA4P22459 653 aa11.5□□□□□ -0.57
TSPAN6-205ENST00000614008 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
TSPAN6-205ENST00000614008 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
TSPAN6-205ENST00000614008 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms