RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
GYPA-209ENST00000512789 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
GYPA-209ENST00000512789 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
GYPA-209ENST00000512789 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
GYPA-209ENST00000512789 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
GYPA-209ENST00000512789 FOXD1Q16676 465 aa14.74□□□□□ -0.05
GYPA-209ENST00000512789 ADRA2BP18089 450 aa14.14□□□□□ -0.15
GYPA-209ENST00000512789 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
GYPA-209ENST00000512789 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
GYPA-209ENST00000512789 MSH5O43196 834 aa13.61□□□□□ -0.23
GYPA-209ENST00000512789 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
GYPA-209ENST00000512789 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
GYPA-209ENST00000512789 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
GYPA-209ENST00000512789 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
GYPA-209ENST00000512789 KCNA4P22459 653 aa12.99□□□□□ -0.33
GYPA-209ENST00000512789 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
GYPA-209ENST00000512789 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
GYPA-209ENST00000512789 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
GYPA-209ENST00000512789 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
GYPA-209ENST00000512789 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
GYPA-209ENST00000512789 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
GYPA-209ENST00000512789 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
GYPA-209ENST00000512789 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
GYPA-209ENST00000512789 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
GYPA-209ENST00000512789 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
GYPA-209ENST00000512789 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
GYPA-209ENST00000512789 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
GYPA-209ENST00000512789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
GYPA-209ENST00000512789 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
GYPA-209ENST00000512789 ZBTB22O15209 634 aa11.86□□□□□ -0.51
GYPA-209ENST00000512789 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
GYPA-209ENST00000512789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
GYPA-209ENST00000512789 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
GYPA-209ENST00000512789 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
GYPA-209ENST00000512789 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
GYPA-209ENST00000512789 APLP2Q06481 763 aa11.66□□□□□ -0.54
GYPA-209ENST00000512789 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
GYPA-209ENST00000512789 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
GYPA-209ENST00000512789 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
GYPA-209ENST00000512789 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
GYPA-209ENST00000512789 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
GYPA-209ENST00000512789 CAPN15O75808 1086 aa11.33□□□□□ -0.6
GYPA-209ENST00000512789 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
GYPA-209ENST00000512789 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
GYPA-209ENST00000512789 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
GYPA-209ENST00000512789 POLA2Q14181 598 aa11.11□□□□□ -0.63
GYPA-209ENST00000512789 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
GYPA-209ENST00000512789 FBLN2P98095 1184 aa11.07□□□□□ -0.64
GYPA-209ENST00000512789 DSG3P32926 999 aa11.04□□□□□ -0.64
GYPA-209ENST00000512789 ABCB7O75027 752 aa11.03□□□□□ -0.64
GYPA-209ENST00000512789 FKBP8Q14318 412 aa10.91□□□□□ -0.66
GYPA-209ENST00000512789 MKRN4PQ13434 485 aaPredicted RBP10.83□□□□□ -0.68
GYPA-209ENST00000512789 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
GYPA-209ENST00000512789 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
GYPA-209ENST00000512789 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
GYPA-209ENST00000512789 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
GYPA-209ENST00000512789 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
GYPA-209ENST00000512789 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
GYPA-209ENST00000512789 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
GYPA-209ENST00000512789 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
GYPA-209ENST00000512789 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
GYPA-209ENST00000512789 PROM2Q8N271 834 aa10.54□□□□□ -0.72
GYPA-209ENST00000512789 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
GYPA-209ENST00000512789 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
GYPA-209ENST00000512789 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
GYPA-209ENST00000512789 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
GYPA-209ENST00000512789 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
GYPA-209ENST00000512789 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
GYPA-209ENST00000512789 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
GYPA-209ENST00000512789 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
GYPA-209ENST00000512789 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
GYPA-209ENST00000512789 MIER1Q8N108 512 aa10.28□□□□□ -0.76
GYPA-209ENST00000512789 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
GYPA-209ENST00000512789 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
GYPA-209ENST00000512789 POTEHQ6S545 545 aa10.26□□□□□ -0.77
GYPA-209ENST00000512789 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
GYPA-209ENST00000512789 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
GYPA-209ENST00000512789 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
GYPA-209ENST00000512789 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
GYPA-209ENST00000512789 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
GYPA-209ENST00000512789 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
GYPA-209ENST00000512789 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
GYPA-209ENST00000512789 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
GYPA-209ENST00000512789 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
GYPA-209ENST00000512789 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
GYPA-209ENST00000512789 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
GYPA-209ENST00000512789 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
GYPA-209ENST00000512789 GSE1Q14687 1217 aa9.96□□□□□ -0.82
GYPA-209ENST00000512789 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
GYPA-209ENST00000512789 FAM212AQ96EL1 285 aa9.94□□□□□ -0.82
GYPA-209ENST00000512789 CHADLQ6NUI6 762 aa9.93□□□□□ -0.82
GYPA-209ENST00000512789 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
GYPA-209ENST00000512789 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
GYPA-209ENST00000512789 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
GYPA-209ENST00000512789 MNX1P50219 401 aaPredicted RBP9.89□□□□□ -0.83
GYPA-209ENST00000512789 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
GYPA-209ENST00000512789 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
GYPA-209ENST00000512789 NUBP1P53384 320 aa9.88□□□□□ -0.83
GYPA-209ENST00000512789 PKD2Q13563 968 aa9.84□□□□□ -0.83
GYPA-209ENST00000512789 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms