RNA–Protein interactions for RNA: ENST00000484320.6

SSR2-211, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,148 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-211ENST00000484320 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
SSR2-211ENST00000484320 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
SSR2-211ENST00000484320 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
SSR2-211ENST00000484320 ABCC9O60706 1549 aa28.18■■■□□ 2.1
SSR2-211ENST00000484320 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
SSR2-211ENST00000484320 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
SSR2-211ENST00000484320 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
SSR2-211ENST00000484320 NACADO15069 1562 aa27.74■■■□□ 2.03
SSR2-211ENST00000484320 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
SSR2-211ENST00000484320 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
SSR2-211ENST00000484320 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
SSR2-211ENST00000484320 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
SSR2-211ENST00000484320 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
SSR2-211ENST00000484320 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
SSR2-211ENST00000484320 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
SSR2-211ENST00000484320 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
SSR2-211ENST00000484320 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
SSR2-211ENST00000484320 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
SSR2-211ENST00000484320 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.78
SSR2-211ENST00000484320 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
SSR2-211ENST00000484320 WIZO95785 1651 aa25.93■■□□□ 1.74
SSR2-211ENST00000484320 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
SSR2-211ENST00000484320 PEG3Q9GZU2 1588 aa25.83■■□□□ 1.73
SSR2-211ENST00000484320 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
SSR2-211ENST00000484320 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
SSR2-211ENST00000484320 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
SSR2-211ENST00000484320 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
SSR2-211ENST00000484320 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
SSR2-211ENST00000484320 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
SSR2-211ENST00000484320 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
SSR2-211ENST00000484320 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
SSR2-211ENST00000484320 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
SSR2-211ENST00000484320 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
SSR2-211ENST00000484320 CFTRP13569 1480 aa24.92■■□□□ 1.58
SSR2-211ENST00000484320 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
SSR2-211ENST00000484320 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
SSR2-211ENST00000484320 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
SSR2-211ENST00000484320 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
SSR2-211ENST00000484320 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
SSR2-211ENST00000484320 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SSR2-211ENST00000484320 NESP48681 1621 aa24.66■■□□□ 1.54
SSR2-211ENST00000484320 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
SSR2-211ENST00000484320 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
SSR2-211ENST00000484320 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
SSR2-211ENST00000484320 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
SSR2-211ENST00000484320 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
SSR2-211ENST00000484320 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
SSR2-211ENST00000484320 CUX1P39880 1505 aa24.48■■□□□ 1.51
SSR2-211ENST00000484320 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
SSR2-211ENST00000484320 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SSR2-211ENST00000484320 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
SSR2-211ENST00000484320 EEA1Q15075 1411 aa24.29■■□□□ 1.48
SSR2-211ENST00000484320 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
SSR2-211ENST00000484320 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
SSR2-211ENST00000484320 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SSR2-211ENST00000484320 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
SSR2-211ENST00000484320 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
SSR2-211ENST00000484320 SOGA1O94964 1423 aa24.24■■□□□ 1.47
SSR2-211ENST00000484320 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
SSR2-211ENST00000484320 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
SSR2-211ENST00000484320 WDR62O43379 1518 aa24.14■■□□□ 1.45
SSR2-211ENST00000484320 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
SSR2-211ENST00000484320 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
SSR2-211ENST00000484320 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
SSR2-211ENST00000484320 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
SSR2-211ENST00000484320 CUX2O14529 1486 aa24.06■■□□□ 1.44
SSR2-211ENST00000484320 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
SSR2-211ENST00000484320 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
SSR2-211ENST00000484320 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
SSR2-211ENST00000484320 KIF21BO75037 1637 aa23.96■■□□□ 1.43
SSR2-211ENST00000484320 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
SSR2-211ENST00000484320 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
SSR2-211ENST00000484320 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
SSR2-211ENST00000484320 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
SSR2-211ENST00000484320 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
SSR2-211ENST00000484320 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
SSR2-211ENST00000484320 IGF1RP08069 1367 aa23.85■■□□□ 1.41
SSR2-211ENST00000484320 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
SSR2-211ENST00000484320 GAPVD1Q14C86 1478 aa23.84■■□□□ 1.41
SSR2-211ENST00000484320 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
SSR2-211ENST00000484320 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
SSR2-211ENST00000484320 CUL7Q14999 1698 aa23.79■■□□□ 1.4
SSR2-211ENST00000484320 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
SSR2-211ENST00000484320 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
SSR2-211ENST00000484320 TNIKQ9UKE5 1360 aa23.77■■□□□ 1.4
SSR2-211ENST00000484320 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
SSR2-211ENST00000484320 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
SSR2-211ENST00000484320 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
SSR2-211ENST00000484320 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
SSR2-211ENST00000484320 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
SSR2-211ENST00000484320 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
SSR2-211ENST00000484320 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
SSR2-211ENST00000484320 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
SSR2-211ENST00000484320 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
SSR2-211ENST00000484320 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
SSR2-211ENST00000484320 CTTNBP2Q8WZ74 1663 aa23.49■■□□□ 1.35
SSR2-211ENST00000484320 CLIP1P30622 1438 aa23.49■■□□□ 1.35
SSR2-211ENST00000484320 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
SSR2-211ENST00000484320 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
SSR2-211ENST00000484320 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms