RNA–Protein interactions for RNA: ENST00000306077.4

TMEM43-201, Transcript of transmembrane protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM43, Length 3,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-201ENST00000306077 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
TMEM43-201ENST00000306077 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
TMEM43-201ENST00000306077 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
TMEM43-201ENST00000306077 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
TMEM43-201ENST00000306077 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
TMEM43-201ENST00000306077 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
TMEM43-201ENST00000306077 MYO15BQ96JP2 1530 aa15.02■□□□□ -0
TMEM43-201ENST00000306077 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
TMEM43-201ENST00000306077 ABCC9O60706 1549 aa14.96□□□□□ -0.02
TMEM43-201ENST00000306077 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
TMEM43-201ENST00000306077 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
TMEM43-201ENST00000306077 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
TMEM43-201ENST00000306077 NACADO15069 1562 aa14.65□□□□□ -0.06
TMEM43-201ENST00000306077 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
TMEM43-201ENST00000306077 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
TMEM43-201ENST00000306077 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.08
TMEM43-201ENST00000306077 HRCP23327 699 aa14.51□□□□□ -0.09
TMEM43-201ENST00000306077 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
TMEM43-201ENST00000306077 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
TMEM43-201ENST00000306077 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
TMEM43-201ENST00000306077 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
TMEM43-201ENST00000306077 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
TMEM43-201ENST00000306077 UNC13AQ9UPW8 1703 aa14.34□□□□□ -0.11
TMEM43-201ENST00000306077 WIZO95785 1651 aa14.34□□□□□ -0.11
TMEM43-201ENST00000306077 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
TMEM43-201ENST00000306077 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
TMEM43-201ENST00000306077 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
TMEM43-201ENST00000306077 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
TMEM43-201ENST00000306077 TRIM26Q12899 539 aaPredicted RBP14.13□□□□□ -0.15
TMEM43-201ENST00000306077 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
TMEM43-201ENST00000306077 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
TMEM43-201ENST00000306077 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
TMEM43-201ENST00000306077 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
TMEM43-201ENST00000306077 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
TMEM43-201ENST00000306077 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
TMEM43-201ENST00000306077 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
TMEM43-201ENST00000306077 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
TMEM43-201ENST00000306077 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
TMEM43-201ENST00000306077 EEA1Q15075 1411 aa13.84□□□□□ -0.19
TMEM43-201ENST00000306077 KIF21BO75037 1637 aa13.78□□□□□ -0.2
TMEM43-201ENST00000306077 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.2
TMEM43-201ENST00000306077 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
TMEM43-201ENST00000306077 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
TMEM43-201ENST00000306077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
TMEM43-201ENST00000306077 SOGA1O94964 1423 aa13.72□□□□□ -0.21
TMEM43-201ENST00000306077 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
TMEM43-201ENST00000306077 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
TMEM43-201ENST00000306077 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
TMEM43-201ENST00000306077 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
TMEM43-201ENST00000306077 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
TMEM43-201ENST00000306077 GOLGA3Q08378 1498 aa13.68□□□□□ -0.22
TMEM43-201ENST00000306077 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
TMEM43-201ENST00000306077 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
TMEM43-201ENST00000306077 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
TMEM43-201ENST00000306077 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
TMEM43-201ENST00000306077 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
TMEM43-201ENST00000306077 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
TMEM43-201ENST00000306077 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
TMEM43-201ENST00000306077 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
TMEM43-201ENST00000306077 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.24
TMEM43-201ENST00000306077 RANGAP1P46060 587 aaPredicted RBP13.47□□□□□ -0.25
TMEM43-201ENST00000306077 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
TMEM43-201ENST00000306077 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
TMEM43-201ENST00000306077 VPS8Q8N3P4 1428 aa13.46□□□□□ -0.25
TMEM43-201ENST00000306077 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
TMEM43-201ENST00000306077 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
TMEM43-201ENST00000306077 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
TMEM43-201ENST00000306077 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
TMEM43-201ENST00000306077 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
TMEM43-201ENST00000306077 CLIP1P30622 1438 aa13.42□□□□□ -0.26
TMEM43-201ENST00000306077 CUX1P39880 1505 aa13.41□□□□□ -0.26
TMEM43-201ENST00000306077 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
TMEM43-201ENST00000306077 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
TMEM43-201ENST00000306077 CFTRP13569 1480 aa13.37□□□□□ -0.27
TMEM43-201ENST00000306077 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
TMEM43-201ENST00000306077 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
TMEM43-201ENST00000306077 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
TMEM43-201ENST00000306077 CUX2O14529 1486 aa13.27□□□□□ -0.28
TMEM43-201ENST00000306077 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
TMEM43-201ENST00000306077 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
TMEM43-201ENST00000306077 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
TMEM43-201ENST00000306077 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
TMEM43-201ENST00000306077 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
TMEM43-201ENST00000306077 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
TMEM43-201ENST00000306077 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
TMEM43-201ENST00000306077 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
TMEM43-201ENST00000306077 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
TMEM43-201ENST00000306077 MIER1Q8N108 512 aa13.13□□□□□ -0.31
TMEM43-201ENST00000306077 APLP2Q06481 763 aa13.12□□□□□ -0.31
TMEM43-201ENST00000306077 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
TMEM43-201ENST00000306077 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
TMEM43-201ENST00000306077 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
TMEM43-201ENST00000306077 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
TMEM43-201ENST00000306077 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.31
TMEM43-201ENST00000306077 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
TMEM43-201ENST00000306077 CUL7Q14999 1698 aa13.08□□□□□ -0.32
TMEM43-201ENST00000306077 IGF1RP08069 1367 aa13.07□□□□□ -0.32
TMEM43-201ENST00000306077 ITGAEP38570 1179 aa13.04□□□□□ -0.32
TMEM43-201ENST00000306077 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
TMEM43-201ENST00000306077 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms