RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
CCNK-203ENST00000553865 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
CCNK-203ENST00000553865 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
CCNK-203ENST00000553865 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
CCNK-203ENST00000553865 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
CCNK-203ENST00000553865 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
CCNK-203ENST00000553865 MYT1Q01538 1121 aa14.25□□□□□ -0.13
CCNK-203ENST00000553865 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
CCNK-203ENST00000553865 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.14
CCNK-203ENST00000553865 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
CCNK-203ENST00000553865 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
CCNK-203ENST00000553865 APLP2Q06481 763 aa14.12□□□□□ -0.15
CCNK-203ENST00000553865 ABCC9O60706 1549 aa14.1□□□□□ -0.15
CCNK-203ENST00000553865 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CCNK-203ENST00000553865 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
CCNK-203ENST00000553865 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
CCNK-203ENST00000553865 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
CCNK-203ENST00000553865 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
CCNK-203ENST00000553865 NACADO15069 1562 aa13.91□□□□□ -0.18
CCNK-203ENST00000553865 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
CCNK-203ENST00000553865 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
CCNK-203ENST00000553865 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
CCNK-203ENST00000553865 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
CCNK-203ENST00000553865 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
CCNK-203ENST00000553865 NEFLP07196 543 aa13.66□□□□□ -0.22
CCNK-203ENST00000553865 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
CCNK-203ENST00000553865 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
CCNK-203ENST00000553865 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
CCNK-203ENST00000553865 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
CCNK-203ENST00000553865 CHIC1Q5VXU3 224 aa13.56□□□□□ -0.24
CCNK-203ENST00000553865 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCNK-203ENST00000553865 HRCP23327 699 aa13.48□□□□□ -0.25
CCNK-203ENST00000553865 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
CCNK-203ENST00000553865 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.25
CCNK-203ENST00000553865 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
CCNK-203ENST00000553865 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
CCNK-203ENST00000553865 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
CCNK-203ENST00000553865 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
CCNK-203ENST00000553865 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
CCNK-203ENST00000553865 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
CCNK-203ENST00000553865 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
CCNK-203ENST00000553865 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
CCNK-203ENST00000553865 EEA1Q15075 1411 aa13.1□□□□□ -0.31
CCNK-203ENST00000553865 ITGAEP38570 1179 aa13.09□□□□□ -0.31
CCNK-203ENST00000553865 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
CCNK-203ENST00000553865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
CCNK-203ENST00000553865 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
CCNK-203ENST00000553865 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
CCNK-203ENST00000553865 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
CCNK-203ENST00000553865 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
CCNK-203ENST00000553865 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
CCNK-203ENST00000553865 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
CCNK-203ENST00000553865 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
CCNK-203ENST00000553865 CLSPNQ9HAW4 1339 aa12.92□□□□□ -0.34
CCNK-203ENST00000553865 POLR3GLQ9BT43 218 aa12.92□□□□□ -0.34
CCNK-203ENST00000553865 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
CCNK-203ENST00000553865 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
CCNK-203ENST00000553865 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
CCNK-203ENST00000553865 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
CCNK-203ENST00000553865 WIZO95785 1651 aa12.82□□□□□ -0.36
CCNK-203ENST00000553865 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
CCNK-203ENST00000553865 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
CCNK-203ENST00000553865 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
CCNK-203ENST00000553865 GLIPR1L2Q4G1C9 344 aa12.75□□□□□ -0.37
CCNK-203ENST00000553865 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
CCNK-203ENST00000553865 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
CCNK-203ENST00000553865 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
CCNK-203ENST00000553865 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
CCNK-203ENST00000553865 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
CCNK-203ENST00000553865 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
CCNK-203ENST00000553865 CDK11AQ9UQ88 783 aaPredicted RBP12.7□□□□□ -0.38
CCNK-203ENST00000553865 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
CCNK-203ENST00000553865 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
CCNK-203ENST00000553865 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
CCNK-203ENST00000553865 ANP32CO43423 234 aa12.68□□□□□ -0.38
CCNK-203ENST00000553865 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
CCNK-203ENST00000553865 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
CCNK-203ENST00000553865 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
CCNK-203ENST00000553865 GTF3C3Q9Y5Q9 886 aa12.67□□□□□ -0.38
CCNK-203ENST00000553865 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
CCNK-203ENST00000553865 CLIP1P30622 1438 aa12.65□□□□□ -0.38
CCNK-203ENST00000553865 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
CCNK-203ENST00000553865 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
CCNK-203ENST00000553865 FBLN2P98095 1184 aa12.59□□□□□ -0.39
CCNK-203ENST00000553865 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
CCNK-203ENST00000553865 BICRAQ9NZM4 1560 aa12.58□□□□□ -0.4
CCNK-203ENST00000553865 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
CCNK-203ENST00000553865 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
CCNK-203ENST00000553865 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
CCNK-203ENST00000553865 BCANQ96GW7 911 aa12.56□□□□□ -0.4
CCNK-203ENST00000553865 CUX2O14529 1486 aa12.54□□□□□ -0.4
CCNK-203ENST00000553865 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
CCNK-203ENST00000553865 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
CCNK-203ENST00000553865 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
CCNK-203ENST00000553865 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
CCNK-203ENST00000553865 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
CCNK-203ENST00000553865 UNC13AQ9UPW8 1703 aa12.5□□□□□ -0.41
CCNK-203ENST00000553865 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CCNK-203ENST00000553865 SOGA1O94964 1423 aa12.48□□□□□ -0.41
CCNK-203ENST00000553865 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms