RNA–Protein interactions for RNA: ENST00000496771.5

TSPAN6-203, Transcript of tetraspanin 6, humanhuman

TSL 3

Gene TSPAN6, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-203ENST00000496771 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
TSPAN6-203ENST00000496771 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
TSPAN6-203ENST00000496771 ABCC9O60706 1549 aa42.88■■■■■ 4.46
TSPAN6-203ENST00000496771 RB1CC1Q8TDY2 1594 aa40.93■■■■■ 4.14
TSPAN6-203ENST00000496771 DCAF8L2P0C7V8 631 aa40.83■■■■■ 4.13
TSPAN6-203ENST00000496771 NACADO15069 1562 aa40.74■■■■■ 4.11
TSPAN6-203ENST00000496771 MYO15BQ96JP2 1530 aa40.27■■■■■ 4.04
TSPAN6-203ENST00000496771 ZCCHC6Q5VYS8 1495 aaKnown RBP40.2■■■■■ 4.03
TSPAN6-203ENST00000496771 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
TSPAN6-203ENST00000496771 UNC13AQ9UPW8 1703 aa40■■■■□ 3.99
TSPAN6-203ENST00000496771 DCAF1Q9Y4B6 1507 aa39.96■■■■□ 3.99
TSPAN6-203ENST00000496771 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
TSPAN6-203ENST00000496771 BICRAQ9NZM4 1560 aa39.73■■■■□ 3.95
TSPAN6-203ENST00000496771 SCRIBQ14160 1630 aa39.48■■■■□ 3.91
TSPAN6-203ENST00000496771 SHROOM4Q9ULL8 1493 aa39.15■■■■□ 3.86
TSPAN6-203ENST00000496771 EIF4G1Q04637 1599 aaKnown RBP38.73■■■■□ 3.79
TSPAN6-203ENST00000496771 CC2D2AQ9P2K1 1620 aa38.71■■■■□ 3.79
TSPAN6-203ENST00000496771 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
TSPAN6-203ENST00000496771 SMARCA4P51532 1647 aa37.67■■■■□ 3.62
TSPAN6-203ENST00000496771 NCAPD3P42695 1498 aa37.63■■■■□ 3.61
TSPAN6-203ENST00000496771 ATAD2BQ9ULI0 1458 aa37.6■■■■□ 3.61
TSPAN6-203ENST00000496771 BAZ1AQ9NRL2 1556 aaPredicted RBP37.54■■■■□ 3.6
TSPAN6-203ENST00000496771 SMARCA2P51531 1590 aa37.49■■■■□ 3.59
TSPAN6-203ENST00000496771 HMGXB3Q12766 1538 aa37.36■■■■□ 3.57
TSPAN6-203ENST00000496771 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
TSPAN6-203ENST00000496771 BAZ1BQ9UIG0 1483 aaKnown RBP37.27■■■■□ 3.56
TSPAN6-203ENST00000496771 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
TSPAN6-203ENST00000496771 ERCC6Q03468 1493 aa36.98■■■■□ 3.51
TSPAN6-203ENST00000496771 NESP48681 1621 aa36.96■■■■□ 3.51
TSPAN6-203ENST00000496771 WIZO95785 1651 aa36.92■■■■□ 3.5
TSPAN6-203ENST00000496771 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
TSPAN6-203ENST00000496771 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.46
TSPAN6-203ENST00000496771 CUX2O14529 1486 aa36.69■■■■□ 3.46
TSPAN6-203ENST00000496771 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
TSPAN6-203ENST00000496771 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
TSPAN6-203ENST00000496771 KIF21AQ7Z4S6 1674 aa36.46■■■■□ 3.43
TSPAN6-203ENST00000496771 TOP2AP11388 1531 aaKnown RBP36.44■■■■□ 3.42
TSPAN6-203ENST00000496771 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
TSPAN6-203ENST00000496771 DNAJC5Q9H3Z4 198 aa36.2■■■■□ 3.39
TSPAN6-203ENST00000496771 CFTRP13569 1480 aa36.19■■■■□ 3.38
TSPAN6-203ENST00000496771 MRC2Q9UBG0 1479 aa36.16■■■■□ 3.38
TSPAN6-203ENST00000496771 FANCD2Q9BXW9 1451 aa36.13■■■■□ 3.37
TSPAN6-203ENST00000496771 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
TSPAN6-203ENST00000496771 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
TSPAN6-203ENST00000496771 WDR62O43379 1518 aa36.03■■■■□ 3.36
TSPAN6-203ENST00000496771 PRDM2Q13029 1718 aa35.82■■■■□ 3.32
TSPAN6-203ENST00000496771 URB2Q14146 1524 aaKnown RBP35.8■■■■□ 3.32
TSPAN6-203ENST00000496771 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
TSPAN6-203ENST00000496771 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
TSPAN6-203ENST00000496771 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
TSPAN6-203ENST00000496771 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
TSPAN6-203ENST00000496771 IFT140Q96RY7 1462 aa35.36■■■■□ 3.25
TSPAN6-203ENST00000496771 ZNF608Q9ULD9 1512 aaPredicted RBP35.31■■■■□ 3.24
TSPAN6-203ENST00000496771 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
TSPAN6-203ENST00000496771 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
TSPAN6-203ENST00000496771 TARBP1Q13395 1621 aaKnown RBP35.12■■■■□ 3.21
TSPAN6-203ENST00000496771 EIF4G3O43432 1585 aaKnown RBP35.09■■■■□ 3.21
TSPAN6-203ENST00000496771 RAD54L2Q9Y4B4 1467 aa35.07■■■■□ 3.2
TSPAN6-203ENST00000496771 AQRO60306 1485 aaKnown RBP eCLIP35.06■■■■□ 3.2
TSPAN6-203ENST00000496771 CUX1P39880 1505 aa35.05■■■■□ 3.2
TSPAN6-203ENST00000496771 SOGA1O94964 1423 aa35.03■■■■□ 3.2
TSPAN6-203ENST00000496771 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
TSPAN6-203ENST00000496771 TDRD9Q8NDG6 1382 aaKnown RBP34.93■■■■□ 3.18
TSPAN6-203ENST00000496771 TRIM41Q8WV44 630 aa34.9■■■■□ 3.18
TSPAN6-203ENST00000496771 FBLN2P98095 1184 aa34.8■■■■□ 3.16
TSPAN6-203ENST00000496771 CHD1O14646 1710 aa34.75■■■■□ 3.15
TSPAN6-203ENST00000496771 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
TSPAN6-203ENST00000496771 SNAPC4Q5SXM2 1469 aa34.7■■■■□ 3.15
TSPAN6-203ENST00000496771 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
TSPAN6-203ENST00000496771 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
TSPAN6-203ENST00000496771 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
TSPAN6-203ENST00000496771 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
TSPAN6-203ENST00000496771 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
TSPAN6-203ENST00000496771 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
TSPAN6-203ENST00000496771 GAPVD1Q14C86 1478 aa34.6■■■■□ 3.13
TSPAN6-203ENST00000496771 SYNJ1O43426 1573 aa34.59■■■■□ 3.13
TSPAN6-203ENST00000496771 TOP2BQ02880 1626 aa34.59■■■■□ 3.13
TSPAN6-203ENST00000496771 BIVM-ERCC5R4GMW8 1640 aa34.57■■■■□ 3.12
TSPAN6-203ENST00000496771 CHMP7Q8WUX9 453 aaPredicted RBP34.57■■■■□ 3.12
TSPAN6-203ENST00000496771 MAGI1Q96QZ7 1491 aaPredicted RBP34.57■■■■□ 3.12
TSPAN6-203ENST00000496771 ARHGEF11O15085 1522 aa34.56■■■■□ 3.12
TSPAN6-203ENST00000496771 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
TSPAN6-203ENST00000496771 ABCA5Q8WWZ7 1642 aa34.51■■■■□ 3.11
TSPAN6-203ENST00000496771 SYNJ2O15056 1496 aa34.47■■■■□ 3.11
TSPAN6-203ENST00000496771 CYB5RLQ6IPT4 315 aa34.35■■■■□ 3.09
TSPAN6-203ENST00000496771 CLASP1Q7Z460 1538 aa34.35■■■■□ 3.09
TSPAN6-203ENST00000496771 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
TSPAN6-203ENST00000496771 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
TSPAN6-203ENST00000496771 GRIN2AQ12879 1464 aa34.2■■■■□ 3.06
TSPAN6-203ENST00000496771 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
TSPAN6-203ENST00000496771 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
TSPAN6-203ENST00000496771 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
TSPAN6-203ENST00000496771 NUP160Q12769 1436 aa34.05■■■■□ 3.04
TSPAN6-203ENST00000496771 KIF27Q86VH2 1401 aa33.95■■■■□ 3.02
TSPAN6-203ENST00000496771 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
TSPAN6-203ENST00000496771 IGF1RP08069 1367 aa33.9■■■■□ 3.02
TSPAN6-203ENST00000496771 TRHP20396 242 aaPredicted RBP33.84■■■■□ 3.01
TSPAN6-203ENST00000496771 SHROOM2Q13796 1616 aa33.82■■■■□ 3
TSPAN6-203ENST00000496771 JPH4Q96JJ6 628 aa33.76■■■□□ 2.99
TSPAN6-203ENST00000496771 CUL7Q14999 1698 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms