RNA–Protein interactions for RNA: ENST00000555824.5

SEL1L-204, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 1 (best) BASIC

Gene SEL1L, Length 1,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-204ENST00000555824 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
SEL1L-204ENST00000555824 CCDC180Q9P1Z9 1646 aa36.7■■■■□ 3.47
SEL1L-204ENST00000555824 ABCC9O60706 1549 aa35.09■■■■□ 3.21
SEL1L-204ENST00000555824 ZCCHC6Q5VYS8 1495 aaKnown RBP35.06■■■■□ 3.2
SEL1L-204ENST00000555824 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
SEL1L-204ENST00000555824 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
SEL1L-204ENST00000555824 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
SEL1L-204ENST00000555824 NACADO15069 1562 aa34.28■■■■□ 3.08
SEL1L-204ENST00000555824 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
SEL1L-204ENST00000555824 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
SEL1L-204ENST00000555824 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
SEL1L-204ENST00000555824 UNC13AQ9UPW8 1703 aa33.43■■■□□ 2.94
SEL1L-204ENST00000555824 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
SEL1L-204ENST00000555824 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
SEL1L-204ENST00000555824 CECR2Q9BXF3 1484 aa32.57■■■□□ 2.8
SEL1L-204ENST00000555824 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
SEL1L-204ENST00000555824 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.77
SEL1L-204ENST00000555824 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
SEL1L-204ENST00000555824 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
SEL1L-204ENST00000555824 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
SEL1L-204ENST00000555824 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
SEL1L-204ENST00000555824 WIZO95785 1651 aa32.04■■■□□ 2.72
SEL1L-204ENST00000555824 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
SEL1L-204ENST00000555824 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
SEL1L-204ENST00000555824 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
SEL1L-204ENST00000555824 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
SEL1L-204ENST00000555824 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
SEL1L-204ENST00000555824 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
SEL1L-204ENST00000555824 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
SEL1L-204ENST00000555824 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
SEL1L-204ENST00000555824 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
SEL1L-204ENST00000555824 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
SEL1L-204ENST00000555824 CFTRP13569 1480 aa30.82■■■□□ 2.52
SEL1L-204ENST00000555824 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
SEL1L-204ENST00000555824 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
SEL1L-204ENST00000555824 NESP48681 1621 aa30.68■■■□□ 2.5
SEL1L-204ENST00000555824 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
SEL1L-204ENST00000555824 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
SEL1L-204ENST00000555824 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
SEL1L-204ENST00000555824 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
SEL1L-204ENST00000555824 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
SEL1L-204ENST00000555824 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
SEL1L-204ENST00000555824 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
SEL1L-204ENST00000555824 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
SEL1L-204ENST00000555824 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
SEL1L-204ENST00000555824 CEP164Q9UPV0 1460 aa30.3■■■□□ 2.44
SEL1L-204ENST00000555824 CUX1P39880 1505 aa30.25■■■□□ 2.43
SEL1L-204ENST00000555824 TOP2BQ02880 1626 aa30.21■■■□□ 2.43
SEL1L-204ENST00000555824 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.42
SEL1L-204ENST00000555824 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
SEL1L-204ENST00000555824 ERCC6Q03468 1493 aa30.11■■■□□ 2.41
SEL1L-204ENST00000555824 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
SEL1L-204ENST00000555824 TOPBP1Q92547 1522 aa30.08■■■□□ 2.41
SEL1L-204ENST00000555824 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
SEL1L-204ENST00000555824 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
SEL1L-204ENST00000555824 THOC2Q8NI27 1593 aaKnown RBP29.93■■■□□ 2.38
SEL1L-204ENST00000555824 WDR62O43379 1518 aa29.91■■■□□ 2.38
SEL1L-204ENST00000555824 POLA1P09884 1462 aaPredicted RBP29.9■■■□□ 2.38
SEL1L-204ENST00000555824 SOGA1O94964 1423 aa29.89■■■□□ 2.37
SEL1L-204ENST00000555824 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
SEL1L-204ENST00000555824 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
SEL1L-204ENST00000555824 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
SEL1L-204ENST00000555824 CUX2O14529 1486 aa29.73■■■□□ 2.35
SEL1L-204ENST00000555824 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.35
SEL1L-204ENST00000555824 EEA1Q15075 1411 aa29.7■■■□□ 2.35
SEL1L-204ENST00000555824 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
SEL1L-204ENST00000555824 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
SEL1L-204ENST00000555824 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
SEL1L-204ENST00000555824 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
SEL1L-204ENST00000555824 CSRNP3Q8WYN3 585 aa29.6■■■□□ 2.33
SEL1L-204ENST00000555824 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
SEL1L-204ENST00000555824 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
SEL1L-204ENST00000555824 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
SEL1L-204ENST00000555824 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
SEL1L-204ENST00000555824 IGF1RP08069 1367 aa29.47■■■□□ 2.31
SEL1L-204ENST00000555824 GAPVD1Q14C86 1478 aa29.46■■■□□ 2.31
SEL1L-204ENST00000555824 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.32e-8■■■■■ 35.8
SEL1L-204ENST00000555824 EHMT2Q96KQ7 1210 aa29.42■■■□□ 2.3
SEL1L-204ENST00000555824 PRXQ9BXM0 1461 aa29.37■■■□□ 2.29
SEL1L-204ENST00000555824 KIF21BO75037 1637 aa29.37■■■□□ 2.29
SEL1L-204ENST00000555824 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
SEL1L-204ENST00000555824 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
SEL1L-204ENST00000555824 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
SEL1L-204ENST00000555824 CARMIL1Q5VZK9 1371 aa29.3■■■□□ 2.28
SEL1L-204ENST00000555824 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
SEL1L-204ENST00000555824 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
SEL1L-204ENST00000555824 GOLGA3Q08378 1498 aa29.27■■■□□ 2.28
SEL1L-204ENST00000555824 CUL7Q14999 1698 aa29.26■■■□□ 2.27
SEL1L-204ENST00000555824 UBTFP17480 764 aaKnown RBP29.16■■■□□ 2.26
SEL1L-204ENST00000555824 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
SEL1L-204ENST00000555824 ADAMTS12P58397 1594 aa29.14■■■□□ 2.26
SEL1L-204ENST00000555824 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
SEL1L-204ENST00000555824 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
SEL1L-204ENST00000555824 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
SEL1L-204ENST00000555824 SYNJ2O15056 1496 aa28.99■■■□□ 2.23
SEL1L-204ENST00000555824 GRIN2AQ12879 1464 aa28.93■■■□□ 2.22
SEL1L-204ENST00000555824 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
SEL1L-204ENST00000555824 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
SEL1L-204ENST00000555824 FBLN2P98095 1184 aa28.9■■■□□ 2.22
SEL1L-204ENST00000555824 CTTNBP2Q8WZ74 1663 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms