RNA–Protein interactions for RNA: ENST00000360771.8

GYPA-202, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPA, Length 2,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-202ENST00000360771 POTEDQ86YR6 584 aa13.21□□□□□ -0.3
GYPA-202ENST00000360771 AEBP2Q6ZN18 517 aaPredicted RBP12.06□□□□□ -0.48
GYPA-202ENST00000360771 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.51
GYPA-202ENST00000360771 SENP3Q9H4L4 574 aaPredicted RBP11.12□□□□□ -0.63
GYPA-202ENST00000360771 MSH5O43196 834 aa10.75□□□□□ -0.69
GYPA-202ENST00000360771 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
GYPA-202ENST00000360771 FOXD1Q16676 465 aa10.22□□□□□ -0.77
GYPA-202ENST00000360771 CACNB1Q02641 598 aaPredicted RBP10.12□□□□□ -0.79
GYPA-202ENST00000360771 POTEHQ6S545 545 aa10.06□□□□□ -0.8
GYPA-202ENST00000360771 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
GYPA-202ENST00000360771 PLPPR3Q6T4P5 718 aa9.32□□□□□ -0.92
GYPA-202ENST00000360771 PPP6R1Q9UPN7 881 aa9.29□□□□□ -0.92
GYPA-202ENST00000360771 ADRA2BP18089 450 aa9.22□□□□□ -0.93
GYPA-202ENST00000360771 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
GYPA-202ENST00000360771 KCNA4P22459 653 aa9.12□□□□□ -0.95
GYPA-202ENST00000360771 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.97
GYPA-202ENST00000360771 CSRNP3Q8WYN3 585 aa8.95□□□□□ -0.98
GYPA-202ENST00000360771 SLC24A1O60721 1099 aa8.89□□□□□ -0.99
GYPA-202ENST00000360771 C1QBPQ07021 282 aaKnown RBP8.74□□□□□ -1.01
GYPA-202ENST00000360771 RNF39Q9H2S5 420 aa8.73□□□□□ -1.01
GYPA-202ENST00000360771 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
GYPA-202ENST00000360771 SP7Q8TDD2 431 aaPredicted RBP8.63□□□□□ -1.03
GYPA-202ENST00000360771 SLC4A1APQ9BWU0 796 aaKnown RBP8.62□□□□□ -1.03
GYPA-202ENST00000360771 ZBTB22O15209 634 aa8.54□□□□□ -1.04
GYPA-202ENST00000360771 DNAJC5Q9H3Z4 198 aa8.48□□□□□ -1.05
GYPA-202ENST00000360771 DMRT2Q9Y5R5 561 aa8.45□□□□□ -1.06
GYPA-202ENST00000360771 MAPK8IP2Q13387 824 aaPredicted RBP8.42□□□□□ -1.06
GYPA-202ENST00000360771 PPP4R3CPQ6ZMV5 832 aa8.36□□□□□ -1.07
GYPA-202ENST00000360771 AMER1Q5JTC6 1135 aaPredicted RBP8.29□□□□□ -1.08
GYPA-202ENST00000360771 NPM3O75607 178 aaKnown RBP8.27□□□□□ -1.09
GYPA-202ENST00000360771 PCDH10Q9P2E7 1040 aa8.15□□□□□ -1.1
GYPA-202ENST00000360771 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
GYPA-202ENST00000360771 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
GYPA-202ENST00000360771 LHX8Q68G74 356 aa8.06□□□□□ -1.12
GYPA-202ENST00000360771 NCBP3Q53F19 620 aaKnown RBP8.04□□□□□ -1.12
GYPA-202ENST00000360771 DCAF8L1A6NGE4 600 aa7.97□□□□□ -1.13
GYPA-202ENST00000360771 FKBP8Q14318 412 aa7.96□□□□□ -1.13
GYPA-202ENST00000360771 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
GYPA-202ENST00000360771 FOXD4L1Q9NU39 408 aa7.95□□□□□ -1.14
GYPA-202ENST00000360771 SCAF1Q9H7N4 1312 aaKnown RBP7.88□□□□□ -1.15
GYPA-202ENST00000360771 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
GYPA-202ENST00000360771 RNF216Q9NWF9 866 aaPredicted RBP7.76□□□□□ -1.17
GYPA-202ENST00000360771 PLCB2Q00722 1185 aa7.76□□□□□ -1.17
GYPA-202ENST00000360771 HOXD11P31277 338 aaPredicted RBP7.75□□□□□ -1.17
GYPA-202ENST00000360771 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
GYPA-202ENST00000360771 TAOK2Q9UL54 1235 aa7.74□□□□□ -1.17
GYPA-202ENST00000360771 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
GYPA-202ENST00000360771 TPRNQ4KMQ1 711 aa7.65□□□□□ -1.19
GYPA-202ENST00000360771 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
GYPA-202ENST00000360771 RBM42Q9BTD8 480 aaKnown RBP7.62□□□□□ -1.19
GYPA-202ENST00000360771 POTEMA6NI47 508 aa7.6□□□□□ -1.19
GYPA-202ENST00000360771 KDM2AQ9Y2K7 1162 aa7.59□□□□□ -1.19
GYPA-202ENST00000360771 HAX1O00165 279 aa7.59□□□□□ -1.19
GYPA-202ENST00000360771 BCANQ96GW7 911 aa7.59□□□□□ -1.19
GYPA-202ENST00000360771 ABCC9O60706 1549 aa7.59□□□□□ -1.19
GYPA-202ENST00000360771 FBLN2P98095 1184 aa7.58□□□□□ -1.2
GYPA-202ENST00000360771 ATF5Q9Y2D1 282 aaPredicted RBP7.57□□□□□ -1.2
GYPA-202ENST00000360771 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
GYPA-202ENST00000360771 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
GYPA-202ENST00000360771 DSG3P32926 999 aa7.49□□□□□ -1.21
GYPA-202ENST00000360771 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
GYPA-202ENST00000360771 U3KPZ7 1027 aaPredicted RBP7.46□□□□□ -1.22
GYPA-202ENST00000360771 ATXN8OSP0DMR3 200 aa7.44□□□□□ -1.22
GYPA-202ENST00000360771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.44□□□□□ -1.22
GYPA-202ENST00000360771 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
GYPA-202ENST00000360771 MYCNP04198 464 aaPredicted RBP7.42□□□□□ -1.22
GYPA-202ENST00000360771 PKD2Q13563 968 aa7.42□□□□□ -1.22
GYPA-202ENST00000360771 VSIG10Q8N0Z9 540 aa7.41□□□□□ -1.22
GYPA-202ENST00000360771 NPM1P06748 294 aaKnown RBP eCLIP7.4□□□□□ -1.23
GYPA-202ENST00000360771 IFNLR1Q8IU57 520 aaPredicted RBP7.39□□□□□ -1.23
GYPA-202ENST00000360771 TRIM41Q8WV44 630 aa7.38□□□□□ -1.23
GYPA-202ENST00000360771 SPINK5Q9NQ38 1064 aaPredicted RBP7.37□□□□□ -1.23
GYPA-202ENST00000360771 ILDR1Q86SU0 546 aaPredicted RBP7.35□□□□□ -1.23
GYPA-202ENST00000360771 CUX2O14529 1486 aa7.32□□□□□ -1.24
GYPA-202ENST00000360771 TSHZ2Q9NRE2 1034 aa7.31□□□□□ -1.24
GYPA-202ENST00000360771 PAXIP1Q6ZW49 1069 aaPredicted RBP7.29□□□□□ -1.24
GYPA-202ENST00000360771 GTF3C3Q9Y5Q9 886 aa7.29□□□□□ -1.24
GYPA-202ENST00000360771 CFAP44Q96MT7 982 aa7.28□□□□□ -1.24
GYPA-202ENST00000360771 VASPP50552 380 aaPredicted RBP7.28□□□□□ -1.24
GYPA-202ENST00000360771 NISCHQ9Y2I1 1504 aa7.26□□□□□ -1.25
GYPA-202ENST00000360771 ARXQ96QS3 562 aa7.25□□□□□ -1.25
GYPA-202ENST00000360771 TRHP20396 242 aaPredicted RBP7.21□□□□□ -1.26
GYPA-202ENST00000360771 ABCB7O75027 752 aa7.19□□□□□ -1.26
GYPA-202ENST00000360771 MKRN4PQ13434 485 aaPredicted RBP7.19□□□□□ -1.26
GYPA-202ENST00000360771 SPDYE4A6NLX3 237 aa7.18□□□□□ -1.26
GYPA-202ENST00000360771 PIP4P2Q8N4L2 257 aa7.18□□□□□ -1.26
GYPA-202ENST00000360771 PROM2Q8N271 834 aa7.17□□□□□ -1.26
GYPA-202ENST00000360771 BBXQ8WY36 941 aaPredicted RBP7.17□□□□□ -1.26
GYPA-202ENST00000360771 TMEM132AQ24JP5 1023 aa7.16□□□□□ -1.26
GYPA-202ENST00000360771 RGL2O15211 777 aa7.16□□□□□ -1.26
GYPA-202ENST00000360771 FBXO3Q9UK99 471 aa7.16□□□□□ -1.26
GYPA-202ENST00000360771 CAPN15O75808 1086 aa7.14□□□□□ -1.27
GYPA-202ENST00000360771 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.11□□□□□ -1.27
GYPA-202ENST00000360771 POLA2Q14181 598 aa7.1□□□□□ -1.27
GYPA-202ENST00000360771 HOMEZQ8IX15 550 aa7.08□□□□□ -1.28
GYPA-202ENST00000360771 ECM2O94769 699 aaPredicted RBP7.08□□□□□ -1.28
GYPA-202ENST00000360771 ZNF219Q9P2Y4 722 aaPredicted RBP7.08□□□□□ -1.28
GYPA-202ENST00000360771 CECR2Q9BXF3 1484 aa7.07□□□□□ -1.28
GYPA-202ENST00000360771 GABBR2O75899 941 aa7.07□□□□□ -1.28
GYPA-202ENST00000360771 SPRYD3Q8NCJ5 442 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms