RNA–Protein interactions for RNA: ENST00000514213.6

USO1-204, Transcript of USO1 vesicle transport factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USO1, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-204ENST00000514213 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
USO1-204ENST00000514213 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
USO1-204ENST00000514213 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
USO1-204ENST00000514213 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
USO1-204ENST00000514213 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
USO1-204ENST00000514213 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
USO1-204ENST00000514213 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
USO1-204ENST00000514213 HRCP23327 699 aa18.15■□□□□ 0.5
USO1-204ENST00000514213 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
USO1-204ENST00000514213 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
USO1-204ENST00000514213 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
USO1-204ENST00000514213 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
USO1-204ENST00000514213 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
USO1-204ENST00000514213 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
USO1-204ENST00000514213 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
USO1-204ENST00000514213 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.4
USO1-204ENST00000514213 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.4
USO1-204ENST00000514213 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
USO1-204ENST00000514213 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
USO1-204ENST00000514213 MYT1Q01538 1121 aa17.35■□□□□ 0.37
USO1-204ENST00000514213 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.37
USO1-204ENST00000514213 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
USO1-204ENST00000514213 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
USO1-204ENST00000514213 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
USO1-204ENST00000514213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
USO1-204ENST00000514213 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
USO1-204ENST00000514213 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
USO1-204ENST00000514213 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
USO1-204ENST00000514213 ABCC9O60706 1549 aa17.11■□□□□ 0.33
USO1-204ENST00000514213 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
USO1-204ENST00000514213 NEUROD1Q13562 356 aa17■□□□□ 0.31
USO1-204ENST00000514213 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
USO1-204ENST00000514213 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
USO1-204ENST00000514213 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
USO1-204ENST00000514213 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
USO1-204ENST00000514213 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
USO1-204ENST00000514213 DIEXFQ68CQ4 756 aaKnown RBP16.8■□□□□ 0.28
USO1-204ENST00000514213 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
USO1-204ENST00000514213 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
USO1-204ENST00000514213 MROH2BQ7Z745 1585 aa16.73■□□□□ 0.27
USO1-204ENST00000514213 APLP2Q06481 763 aa16.67■□□□□ 0.26
USO1-204ENST00000514213 WIZO95785 1651 aa16.63■□□□□ 0.25
USO1-204ENST00000514213 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.25
USO1-204ENST00000514213 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
USO1-204ENST00000514213 SOGA1O94964 1423 aa16.51■□□□□ 0.23
USO1-204ENST00000514213 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
USO1-204ENST00000514213 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
USO1-204ENST00000514213 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
USO1-204ENST00000514213 NACADO15069 1562 aa16.47■□□□□ 0.23
USO1-204ENST00000514213 ITGAEP38570 1179 aa16.44■□□□□ 0.22
USO1-204ENST00000514213 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
USO1-204ENST00000514213 MIER1Q8N108 512 aa16.38■□□□□ 0.21
USO1-204ENST00000514213 BCANQ96GW7 911 aa16.37■□□□□ 0.21
USO1-204ENST00000514213 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
USO1-204ENST00000514213 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
USO1-204ENST00000514213 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
USO1-204ENST00000514213 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
USO1-204ENST00000514213 CLIP1P30622 1438 aa16.22■□□□□ 0.19
USO1-204ENST00000514213 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
USO1-204ENST00000514213 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
USO1-204ENST00000514213 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
USO1-204ENST00000514213 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
USO1-204ENST00000514213 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
USO1-204ENST00000514213 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
USO1-204ENST00000514213 EEA1Q15075 1411 aa16.11■□□□□ 0.17
USO1-204ENST00000514213 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
USO1-204ENST00000514213 P3H3Q8IVL6 736 aa16.05■□□□□ 0.16
USO1-204ENST00000514213 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
USO1-204ENST00000514213 KANK4Q5T7N3 995 aaPredicted RBP16.04■□□□□ 0.16
USO1-204ENST00000514213 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
USO1-204ENST00000514213 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
USO1-204ENST00000514213 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
USO1-204ENST00000514213 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
USO1-204ENST00000514213 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
USO1-204ENST00000514213 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.14
USO1-204ENST00000514213 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
USO1-204ENST00000514213 NEFLP07196 543 aa15.91■□□□□ 0.14
USO1-204ENST00000514213 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
USO1-204ENST00000514213 FKBP8Q14318 412 aa15.9■□□□□ 0.14
USO1-204ENST00000514213 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
USO1-204ENST00000514213 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
USO1-204ENST00000514213 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
USO1-204ENST00000514213 SIN3AQ96ST3 1273 aa15.84■□□□□ 0.13
USO1-204ENST00000514213 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
USO1-204ENST00000514213 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
USO1-204ENST00000514213 KIF21BO75037 1637 aa15.79■□□□□ 0.12
USO1-204ENST00000514213 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
USO1-204ENST00000514213 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
USO1-204ENST00000514213 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
USO1-204ENST00000514213 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
USO1-204ENST00000514213 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
USO1-204ENST00000514213 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
USO1-204ENST00000514213 ARID3CA6NKF2 412 aa15.71■□□□□ 0.1
USO1-204ENST00000514213 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
USO1-204ENST00000514213 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
USO1-204ENST00000514213 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
USO1-204ENST00000514213 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
USO1-204ENST00000514213 ANP32CO43423 234 aa15.66■□□□□ 0.1
USO1-204ENST00000514213 NBR1Q14596 966 aa15.65■□□□□ 0.1
USO1-204ENST00000514213 RBM19Q9Y4C8 960 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms