RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-215ENST00000529008 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
SSR2-215ENST00000529008 ABCC9O60706 1549 aa18.46■□□□□ 0.55
SSR2-215ENST00000529008 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
SSR2-215ENST00000529008 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
SSR2-215ENST00000529008 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
SSR2-215ENST00000529008 NACADO15069 1562 aa17.32■□□□□ 0.36
SSR2-215ENST00000529008 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
SSR2-215ENST00000529008 PABPN1Q86U42 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSR2-215ENST00000529008 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
SSR2-215ENST00000529008 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
SSR2-215ENST00000529008 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
SSR2-215ENST00000529008 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
SSR2-215ENST00000529008 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
SSR2-215ENST00000529008 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
SSR2-215ENST00000529008 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
SSR2-215ENST00000529008 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
SSR2-215ENST00000529008 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
SSR2-215ENST00000529008 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
SSR2-215ENST00000529008 NCAPD3P42695 1498 aa16■□□□□ 0.15
SSR2-215ENST00000529008 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
SSR2-215ENST00000529008 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
SSR2-215ENST00000529008 ERCC6Q03468 1493 aa15.96■□□□□ 0.14
SSR2-215ENST00000529008 CUX2O14529 1486 aa15.91■□□□□ 0.14
SSR2-215ENST00000529008 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
SSR2-215ENST00000529008 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
SSR2-215ENST00000529008 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
SSR2-215ENST00000529008 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
SSR2-215ENST00000529008 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
SSR2-215ENST00000529008 NESP48681 1621 aa15.82■□□□□ 0.12
SSR2-215ENST00000529008 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
SSR2-215ENST00000529008 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
SSR2-215ENST00000529008 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
SSR2-215ENST00000529008 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
SSR2-215ENST00000529008 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
SSR2-215ENST00000529008 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
SSR2-215ENST00000529008 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
SSR2-215ENST00000529008 WIZO95785 1651 aa15.48■□□□□ 0.07
SSR2-215ENST00000529008 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
SSR2-215ENST00000529008 WDR62O43379 1518 aa15.43■□□□□ 0.06
SSR2-215ENST00000529008 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SSR2-215ENST00000529008 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
SSR2-215ENST00000529008 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
SSR2-215ENST00000529008 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
SSR2-215ENST00000529008 CFTRP13569 1480 aa15.33■□□□□ 0.04
SSR2-215ENST00000529008 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
SSR2-215ENST00000529008 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
SSR2-215ENST00000529008 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
SSR2-215ENST00000529008 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
SSR2-215ENST00000529008 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
SSR2-215ENST00000529008 IFT140Q96RY7 1462 aa15.08■□□□□ 0.01
SSR2-215ENST00000529008 TOPBP1Q92547 1522 aa15.06■□□□□ 0
SSR2-215ENST00000529008 PRDM2Q13029 1718 aa15.03■□□□□ -0
SSR2-215ENST00000529008 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
SSR2-215ENST00000529008 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
SSR2-215ENST00000529008 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
SSR2-215ENST00000529008 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
SSR2-215ENST00000529008 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
SSR2-215ENST00000529008 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
SSR2-215ENST00000529008 ARHGEF11O15085 1522 aa14.95□□□□□ -0.02
SSR2-215ENST00000529008 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
SSR2-215ENST00000529008 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
SSR2-215ENST00000529008 TARBP1Q13395 1621 aaKnown RBP14.89□□□□□ -0.03
SSR2-215ENST00000529008 FBLN2P98095 1184 aa14.87□□□□□ -0.03
SSR2-215ENST00000529008 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
SSR2-215ENST00000529008 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
SSR2-215ENST00000529008 TDRD9Q8NDG6 1382 aaKnown RBP14.84□□□□□ -0.03
SSR2-215ENST00000529008 CHD1O14646 1710 aa14.82□□□□□ -0.04
SSR2-215ENST00000529008 SOGA1O94964 1423 aa14.82□□□□□ -0.04
SSR2-215ENST00000529008 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
SSR2-215ENST00000529008 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
SSR2-215ENST00000529008 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
SSR2-215ENST00000529008 CUX1P39880 1505 aa14.76□□□□□ -0.05
SSR2-215ENST00000529008 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
SSR2-215ENST00000529008 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
SSR2-215ENST00000529008 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
SSR2-215ENST00000529008 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
SSR2-215ENST00000529008 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
SSR2-215ENST00000529008 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.06
SSR2-215ENST00000529008 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
SSR2-215ENST00000529008 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
SSR2-215ENST00000529008 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
SSR2-215ENST00000529008 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
SSR2-215ENST00000529008 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
SSR2-215ENST00000529008 PBRM1Q86U86 1689 aa14.58□□□□□ -0.07
SSR2-215ENST00000529008 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
SSR2-215ENST00000529008 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
SSR2-215ENST00000529008 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
SSR2-215ENST00000529008 ADAMTS12P58397 1594 aa14.51□□□□□ -0.09
SSR2-215ENST00000529008 NUP160Q12769 1436 aa14.49□□□□□ -0.09
SSR2-215ENST00000529008 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
SSR2-215ENST00000529008 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
SSR2-215ENST00000529008 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
SSR2-215ENST00000529008 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
SSR2-215ENST00000529008 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
SSR2-215ENST00000529008 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
SSR2-215ENST00000529008 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
SSR2-215ENST00000529008 PRG4Q92954 1404 aaPredicted RBP14.36□□□□□ -0.11
SSR2-215ENST00000529008 AEBP2Q6ZN18 517 aaPredicted RBP14.36□□□□□ -0.11
SSR2-215ENST00000529008 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
SSR2-215ENST00000529008 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms