RNA–Protein interactions for RNA: ENST00000492498.5

RAE1-208, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-208ENST00000492498 NISCHQ9Y2I1 1504 aa40.75■■■■■ 4.11
RAE1-208ENST00000492498 CCDC180Q9P1Z9 1646 aa36.1■■■■□ 3.37
RAE1-208ENST00000492498 ABCC9O60706 1549 aa35.09■■■■□ 3.21
RAE1-208ENST00000492498 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
RAE1-208ENST00000492498 DCAF8L2P0C7V8 631 aa33.95■■■■□ 3.03
RAE1-208ENST00000492498 NACADO15069 1562 aa33.93■■■■□ 3.02
RAE1-208ENST00000492498 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
RAE1-208ENST00000492498 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
RAE1-208ENST00000492498 DCAF1Q9Y4B6 1507 aa33.76■■■■□ 3
RAE1-208ENST00000492498 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
RAE1-208ENST00000492498 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
RAE1-208ENST00000492498 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
RAE1-208ENST00000492498 BICRAQ9NZM4 1560 aa32.81■■■□□ 2.84
RAE1-208ENST00000492498 SHROOM4Q9ULL8 1493 aa32.58■■■□□ 2.81
RAE1-208ENST00000492498 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
RAE1-208ENST00000492498 EIF4G1Q04637 1599 aaKnown RBP31.95■■■□□ 2.71
RAE1-208ENST00000492498 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
RAE1-208ENST00000492498 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
RAE1-208ENST00000492498 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
RAE1-208ENST00000492498 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
RAE1-208ENST00000492498 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.61
RAE1-208ENST00000492498 ATAD2BQ9ULI0 1458 aa31.34■■■□□ 2.61
RAE1-208ENST00000492498 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
RAE1-208ENST00000492498 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
RAE1-208ENST00000492498 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
RAE1-208ENST00000492498 HMGXB3Q12766 1538 aa31.16■■■□□ 2.58
RAE1-208ENST00000492498 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
RAE1-208ENST00000492498 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
RAE1-208ENST00000492498 WIZO95785 1651 aa31.03■■■□□ 2.56
RAE1-208ENST00000492498 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
RAE1-208ENST00000492498 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.47
RAE1-208ENST00000492498 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
RAE1-208ENST00000492498 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
RAE1-208ENST00000492498 NESP48681 1621 aa30.41■■■□□ 2.46
RAE1-208ENST00000492498 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
RAE1-208ENST00000492498 CFTRP13569 1480 aa30.27■■■□□ 2.44
RAE1-208ENST00000492498 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
RAE1-208ENST00000492498 PDS5BQ9NTI5 1447 aa30.24■■■□□ 2.43
RAE1-208ENST00000492498 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
RAE1-208ENST00000492498 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
RAE1-208ENST00000492498 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
RAE1-208ENST00000492498 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
RAE1-208ENST00000492498 THOC2Q8NI27 1593 aaKnown RBP29.91■■■□□ 2.38
RAE1-208ENST00000492498 MRC2Q9UBG0 1479 aa29.89■■■□□ 2.38
RAE1-208ENST00000492498 CUX2O14529 1486 aa29.87■■■□□ 2.37
RAE1-208ENST00000492498 WDR62O43379 1518 aa29.77■■■□□ 2.36
RAE1-208ENST00000492498 URB2Q14146 1524 aaKnown RBP29.7■■■□□ 2.34
RAE1-208ENST00000492498 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
RAE1-208ENST00000492498 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
RAE1-208ENST00000492498 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
RAE1-208ENST00000492498 CUX1P39880 1505 aa29.42■■■□□ 2.3
RAE1-208ENST00000492498 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
RAE1-208ENST00000492498 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
RAE1-208ENST00000492498 POLA1P09884 1462 aaPredicted RBP29.34■■■□□ 2.29
RAE1-208ENST00000492498 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
RAE1-208ENST00000492498 SOGA1O94964 1423 aa29.26■■■□□ 2.27
RAE1-208ENST00000492498 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
RAE1-208ENST00000492498 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
RAE1-208ENST00000492498 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
RAE1-208ENST00000492498 TARBP1Q13395 1621 aaKnown RBP29.21■■■□□ 2.27
RAE1-208ENST00000492498 RAD54L2Q9Y4B4 1467 aa29.2■■■□□ 2.26
RAE1-208ENST00000492498 ZNF608Q9ULD9 1512 aaPredicted RBP29.15■■■□□ 2.26
RAE1-208ENST00000492498 ABCA10Q8WWZ4 1543 aa29.05■■■□□ 2.24
RAE1-208ENST00000492498 WDR97A6NE52 1622 aa29.05■■■□□ 2.24
RAE1-208ENST00000492498 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.248e-8■■■■■ 32.1
RAE1-208ENST00000492498 EIF4G3O43432 1585 aaKnown RBP29.04■■■□□ 2.24
RAE1-208ENST00000492498 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
RAE1-208ENST00000492498 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
RAE1-208ENST00000492498 GRIN2BQ13224 1484 aa28.88■■■□□ 2.21
RAE1-208ENST00000492498 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
RAE1-208ENST00000492498 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
RAE1-208ENST00000492498 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
RAE1-208ENST00000492498 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
RAE1-208ENST00000492498 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
RAE1-208ENST00000492498 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
RAE1-208ENST00000492498 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
RAE1-208ENST00000492498 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
RAE1-208ENST00000492498 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
RAE1-208ENST00000492498 FBLN2P98095 1184 aa28.66■■■□□ 2.18
RAE1-208ENST00000492498 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
RAE1-208ENST00000492498 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
RAE1-208ENST00000492498 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
RAE1-208ENST00000492498 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
RAE1-208ENST00000492498 IGF1RP08069 1367 aa28.6■■■□□ 2.17
RAE1-208ENST00000492498 CHD1O14646 1710 aa28.59■■■□□ 2.17
RAE1-208ENST00000492498 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
RAE1-208ENST00000492498 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
RAE1-208ENST00000492498 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
RAE1-208ENST00000492498 CUL7Q14999 1698 aa28.47■■■□□ 2.15
RAE1-208ENST00000492498 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
RAE1-208ENST00000492498 EEA1Q15075 1411 aa28.38■■■□□ 2.13
RAE1-208ENST00000492498 NUP160Q12769 1436 aa28.37■■■□□ 2.13
RAE1-208ENST00000492498 CLASP1Q7Z460 1538 aa28.35■■■□□ 2.13
RAE1-208ENST00000492498 CEP170Q5SW79 1584 aa28.31■■■□□ 2.12
RAE1-208ENST00000492498 CSRNP3Q8WYN3 585 aa28.3■■■□□ 2.12
RAE1-208ENST00000492498 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
RAE1-208ENST00000492498 PRXQ9BXM0 1461 aa28.24■■■□□ 2.11
RAE1-208ENST00000492498 FAM9AQ8IZU1 332 aaPredicted RBP28.19■■■□□ 2.1
RAE1-208ENST00000492498 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
RAE1-208ENST00000492498 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms