RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
GYPA-212ENST00000616983 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
GYPA-212ENST00000616983 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
GYPA-212ENST00000616983 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.26
GYPA-212ENST00000616983 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
GYPA-212ENST00000616983 FOXD1Q16676 465 aa12.8□□□□□ -0.36
GYPA-212ENST00000616983 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
GYPA-212ENST00000616983 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
GYPA-212ENST00000616983 MSH5O43196 834 aa12.12□□□□□ -0.47
GYPA-212ENST00000616983 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
GYPA-212ENST00000616983 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
GYPA-212ENST00000616983 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
GYPA-212ENST00000616983 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
GYPA-212ENST00000616983 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
GYPA-212ENST00000616983 KCNA4P22459 653 aa11.7□□□□□ -0.54
GYPA-212ENST00000616983 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
GYPA-212ENST00000616983 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
GYPA-212ENST00000616983 ADRA2BP18089 450 aa11.62□□□□□ -0.55
GYPA-212ENST00000616983 DAXXQ9UER7 740 aaPredicted RBP11.51□□□□□ -0.57
GYPA-212ENST00000616983 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
GYPA-212ENST00000616983 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
GYPA-212ENST00000616983 ARXQ96QS3 562 aa11.06□□□□□ -0.64
GYPA-212ENST00000616983 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
GYPA-212ENST00000616983 BCANQ96GW7 911 aa10.94□□□□□ -0.66
GYPA-212ENST00000616983 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
GYPA-212ENST00000616983 ZBTB22O15209 634 aa10.83□□□□□ -0.68
GYPA-212ENST00000616983 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
GYPA-212ENST00000616983 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
GYPA-212ENST00000616983 MAPK8IP2Q13387 824 aaPredicted RBP10.78□□□□□ -0.68
GYPA-212ENST00000616983 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
GYPA-212ENST00000616983 TPRNQ4KMQ1 711 aa10.74□□□□□ -0.69
GYPA-212ENST00000616983 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
GYPA-212ENST00000616983 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
GYPA-212ENST00000616983 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
GYPA-212ENST00000616983 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
GYPA-212ENST00000616983 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
GYPA-212ENST00000616983 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
GYPA-212ENST00000616983 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
GYPA-212ENST00000616983 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
GYPA-212ENST00000616983 FKBP8Q14318 412 aa10.52□□□□□ -0.72
GYPA-212ENST00000616983 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
GYPA-212ENST00000616983 APLP2Q06481 763 aa10.5□□□□□ -0.73
GYPA-212ENST00000616983 PPP4R3CPQ6ZMV5 832 aa10.48□□□□□ -0.73
GYPA-212ENST00000616983 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
GYPA-212ENST00000616983 PELP1Q8IZL8 1130 aaKnown RBP10.4□□□□□ -0.75
GYPA-212ENST00000616983 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
GYPA-212ENST00000616983 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
GYPA-212ENST00000616983 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
GYPA-212ENST00000616983 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
GYPA-212ENST00000616983 RNF39Q9H2S5 420 aa10.31□□□□□ -0.76
GYPA-212ENST00000616983 HOXD11P31277 338 aaPredicted RBP10.29□□□□□ -0.76
GYPA-212ENST00000616983 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
GYPA-212ENST00000616983 MYT1Q01538 1121 aa10.28□□□□□ -0.76
GYPA-212ENST00000616983 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
GYPA-212ENST00000616983 C14orf37Q86TY3 774 aa10.21□□□□□ -0.77
GYPA-212ENST00000616983 FBLN2P98095 1184 aa10.15□□□□□ -0.78
GYPA-212ENST00000616983 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
GYPA-212ENST00000616983 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
GYPA-212ENST00000616983 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
GYPA-212ENST00000616983 CNKSR2Q8WXI2 1034 aa10.1□□□□□ -0.79
GYPA-212ENST00000616983 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
GYPA-212ENST00000616983 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
GYPA-212ENST00000616983 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
GYPA-212ENST00000616983 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
GYPA-212ENST00000616983 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
GYPA-212ENST00000616983 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
GYPA-212ENST00000616983 NBR1Q14596 966 aa9.92□□□□□ -0.82
GYPA-212ENST00000616983 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
GYPA-212ENST00000616983 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.83
GYPA-212ENST00000616983 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
GYPA-212ENST00000616983 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
GYPA-212ENST00000616983 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
GYPA-212ENST00000616983 HRCP23327 699 aa9.84□□□□□ -0.83
GYPA-212ENST00000616983 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
GYPA-212ENST00000616983 PKD2Q13563 968 aa9.81□□□□□ -0.84
GYPA-212ENST00000616983 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
GYPA-212ENST00000616983 DNAJC5Q9H3Z4 198 aa9.77□□□□□ -0.85
GYPA-212ENST00000616983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.76□□□□□ -0.85
GYPA-212ENST00000616983 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
GYPA-212ENST00000616983 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
GYPA-212ENST00000616983 POTEHQ6S545 545 aa9.65□□□□□ -0.86
GYPA-212ENST00000616983 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
GYPA-212ENST00000616983 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
GYPA-212ENST00000616983 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
GYPA-212ENST00000616983 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
GYPA-212ENST00000616983 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
GYPA-212ENST00000616983 CCDC9Q9Y3X0 531 aaKnown RBP9.55□□□□□ -0.88
GYPA-212ENST00000616983 DSG3P32926 999 aa9.53□□□□□ -0.88
GYPA-212ENST00000616983 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
GYPA-212ENST00000616983 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
GYPA-212ENST00000616983 CAPN15O75808 1086 aa9.48□□□□□ -0.89
GYPA-212ENST00000616983 SPINK5Q9NQ38 1064 aaPredicted RBP9.48□□□□□ -0.89
GYPA-212ENST00000616983 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.89
GYPA-212ENST00000616983 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
GYPA-212ENST00000616983 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
GYPA-212ENST00000616983 ZMYND15Q9H091 742 aa9.41□□□□□ -0.9
GYPA-212ENST00000616983 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
GYPA-212ENST00000616983 PROM2Q8N271 834 aa9.39□□□□□ -0.91
GYPA-212ENST00000616983 TRHP20396 242 aaPredicted RBP9.39□□□□□ -0.91
GYPA-212ENST00000616983 RGL2O15211 777 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms