RNA–Protein interactions for RNA: ENST00000282673.5

LIPA-201, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 3

Gene LIPA, Length 753 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-201ENST00000282673 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
LIPA-201ENST00000282673 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
LIPA-201ENST00000282673 ABCC9O60706 1549 aa19.8■□□□□ 0.76
LIPA-201ENST00000282673 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
LIPA-201ENST00000282673 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
LIPA-201ENST00000282673 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
LIPA-201ENST00000282673 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
LIPA-201ENST00000282673 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIPA-201ENST00000282673 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
LIPA-201ENST00000282673 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
LIPA-201ENST00000282673 NACADO15069 1562 aa18.3■□□□□ 0.52
LIPA-201ENST00000282673 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
LIPA-201ENST00000282673 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
LIPA-201ENST00000282673 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
LIPA-201ENST00000282673 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
LIPA-201ENST00000282673 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
LIPA-201ENST00000282673 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
LIPA-201ENST00000282673 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
LIPA-201ENST00000282673 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
LIPA-201ENST00000282673 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
LIPA-201ENST00000282673 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
LIPA-201ENST00000282673 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
LIPA-201ENST00000282673 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
LIPA-201ENST00000282673 CUX2O14529 1486 aa17.13■□□□□ 0.33
LIPA-201ENST00000282673 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
LIPA-201ENST00000282673 NESP48681 1621 aa16.92■□□□□ 0.3
LIPA-201ENST00000282673 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
LIPA-201ENST00000282673 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
LIPA-201ENST00000282673 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
LIPA-201ENST00000282673 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
LIPA-201ENST00000282673 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
LIPA-201ENST00000282673 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
LIPA-201ENST00000282673 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
LIPA-201ENST00000282673 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
LIPA-201ENST00000282673 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
LIPA-201ENST00000282673 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
LIPA-201ENST00000282673 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
LIPA-201ENST00000282673 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
LIPA-201ENST00000282673 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
LIPA-201ENST00000282673 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
LIPA-201ENST00000282673 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
LIPA-201ENST00000282673 WIZO95785 1651 aa16.46■□□□□ 0.23
LIPA-201ENST00000282673 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
LIPA-201ENST00000282673 WDR62O43379 1518 aa16.41■□□□□ 0.22
LIPA-201ENST00000282673 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
LIPA-201ENST00000282673 FOXD1Q16676 465 aa16.26■□□□□ 0.19
LIPA-201ENST00000282673 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
LIPA-201ENST00000282673 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
LIPA-201ENST00000282673 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
LIPA-201ENST00000282673 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
LIPA-201ENST00000282673 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
LIPA-201ENST00000282673 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
LIPA-201ENST00000282673 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
LIPA-201ENST00000282673 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
LIPA-201ENST00000282673 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
LIPA-201ENST00000282673 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
LIPA-201ENST00000282673 CFTRP13569 1480 aa16.1■□□□□ 0.17
LIPA-201ENST00000282673 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
LIPA-201ENST00000282673 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
LIPA-201ENST00000282673 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
LIPA-201ENST00000282673 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
LIPA-201ENST00000282673 CHD1O14646 1710 aa15.97■□□□□ 0.15
LIPA-201ENST00000282673 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
LIPA-201ENST00000282673 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
LIPA-201ENST00000282673 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
LIPA-201ENST00000282673 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
LIPA-201ENST00000282673 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
LIPA-201ENST00000282673 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
LIPA-201ENST00000282673 TARBP1Q13395 1621 aaKnown RBP15.82■□□□□ 0.12
LIPA-201ENST00000282673 FBLN2P98095 1184 aa15.78■□□□□ 0.12
LIPA-201ENST00000282673 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
LIPA-201ENST00000282673 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
LIPA-201ENST00000282673 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
LIPA-201ENST00000282673 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
LIPA-201ENST00000282673 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
LIPA-201ENST00000282673 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
LIPA-201ENST00000282673 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
LIPA-201ENST00000282673 SOGA1O94964 1423 aa15.62■□□□□ 0.09
LIPA-201ENST00000282673 CUX1P39880 1505 aa15.62■□□□□ 0.09
LIPA-201ENST00000282673 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
LIPA-201ENST00000282673 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
LIPA-201ENST00000282673 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
LIPA-201ENST00000282673 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
LIPA-201ENST00000282673 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
LIPA-201ENST00000282673 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
LIPA-201ENST00000282673 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
LIPA-201ENST00000282673 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
LIPA-201ENST00000282673 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
LIPA-201ENST00000282673 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
LIPA-201ENST00000282673 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
LIPA-201ENST00000282673 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
LIPA-201ENST00000282673 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
LIPA-201ENST00000282673 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
LIPA-201ENST00000282673 ABCA10Q8WWZ4 1543 aa15.4■□□□□ 0.06
LIPA-201ENST00000282673 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
LIPA-201ENST00000282673 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
LIPA-201ENST00000282673 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
LIPA-201ENST00000282673 MSH5O43196 834 aa15.31■□□□□ 0.04
LIPA-201ENST00000282673 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
LIPA-201ENST00000282673 SHROOM2Q13796 1616 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 275.2 ms